RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ZNF354BQ96LW1 612 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 COL21A1Q96P44 957 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 FCRL4Q96PJ5 515 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 CCDC3Q9BQI4 270 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 BTBD2Q9BX70 525 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 GABARAPL3Q9BY60 117 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 TCEAL2Q9H3H9 227 aaPredicted RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 TMCC3Q9ULS5 477 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 TDRD6O60522 2096 aaKnown RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ARRDC5A6NEK1 342 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 DUXAA6NLW8 204 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ENO4A6NNW6 628 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 SLC1A7O00341 560 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ASNA1O43681 348 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 CTSVO60911 334 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 AGR2O95994 175 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 WNT1P04628 370 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ZNF883P0CG24 379 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ALOX12P18054 663 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 CTSKP43235 329 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 CXCR4P61073 352 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 LASP1Q14847 261 aaKnown RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 DUSP7Q16829 419 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 EXOC3L2Q2M3D2 409 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 DEFB134Q4QY38 66 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 COLEC12Q5KU26 742 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ATAD3BQ5T9A4 648 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 TMEM107Q6UX40 140 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 RNF44Q7L0R7 432 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 CLVS1Q8IUQ0 354 aaPredicted RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 NAXDQ8IW45 347 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 NUP43Q8NFH3 380 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 OR4K14Q8NGD5 310 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 OR52J3Q8NH60 311 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ZNF420Q8TAQ5 688 aaPredicted RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 SUN3Q8TAQ9 357 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 MIPOL1Q8TD10 442 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 ZFAND2BQ8WV99 257 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 PATE1Q8WXA2 126 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 WNT2BQ93097 391 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 UCN3Q969E3 161 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 FEVQ99581 238 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 TREX2Q9BQ50 279 aaPredicted RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 PSD2Q9BQI7 771 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 CACYBPQ9HB71 228 aaKnown RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 LYRM4Q9HD34 91 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 PILRAQ9UKJ1 303 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 NDRG4Q9ULP0 352 aaKnown RBP10.23□□□□□ -0.77
H3F3A-202ENST00000366814 DOLKQ9UPQ8 538 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 LIPT1Q9Y234 373 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 SLC9A8Q9Y2E8 581 aa10.23□□□□□ -0.77
H3F3A-202ENST00000366814 A0A0G2JPF8 293 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 SPAARA0A1B0GVQ0 90 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 A0A1W2PR77 199 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 OR5K3A6NET4 321 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 HNRNPCL2B2RXH8 293 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 HNRNPCL3B7ZW38 293 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 TLR4O00206 839 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 B4GALT2O60909 372 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CPNE6O95741 557 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 EIF2S1P05198 315 aaKnown RBP10.22□□□□□ -0.77
H3F3A-202ENST00000366814 HMGN2P05204 90 aaKnown RBP10.22□□□□□ -0.77
H3F3A-202ENST00000366814 C8orf89P0DMQ9 161 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 HNRNPCL4P0DMR1 293 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 SMIM10L1P0DMW3 83 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CD247P20963 164 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 KCNJ5P48544 419 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CLK3P49761 638 aaKnown RBP10.22□□□□□ -0.77
H3F3A-202ENST00000366814 HMGA2P52926 109 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 SKP1P63208 163 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CSNK2BP67870 215 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 SIM1P81133 766 aaPredicted RBP10.22□□□□□ -0.77
H3F3A-202ENST00000366814 HPCAP84074 193 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CDK5R2Q13319 367 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 TUBA3CQ13748 450 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 TRIP6Q15654 476 aaKnown RBP10.22□□□□□ -0.77
H3F3A-202ENST00000366814 NEDD8Q15843 81 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 SYPL1Q16563 259 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CTU2Q2VPK5 515 aaKnown RBP10.22□□□□□ -0.77
H3F3A-202ENST00000366814 GPAT3Q53EU6 434 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 IQCHQ86VS3 1027 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 GKN2Q86XP6 184 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 DEPDC4Q8N2C3 294 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 BPIFB6Q8NFQ5 453 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 OR5D16Q8NGK9 328 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 OR4C15Q8NGM1 316 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 RHBDD1Q8TEB9 315 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 FBLIM1Q8WUP2 373 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 TMIGD2Q96BF3 282 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 ELP4Q96EB1 424 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 SMIM10Q96HG1 83 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CNDP2Q96KP4 475 aaKnown RBP10.22□□□□□ -0.77
H3F3A-202ENST00000366814 NODALQ96S42 347 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 PITX2Q99697 317 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CXorf21Q9HAI6 301 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 BCL2L10Q9HD36 194 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 CCNB1IP1Q9NPC3 277 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 SLC13A4Q9UKG4 626 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 DAPP1Q9UN19 280 aa10.22□□□□□ -0.77
H3F3A-202ENST00000366814 GPC6Q9Y625 555 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms