RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MICU2Q8IYU8 434 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 DTWD1Q8N5C7 304 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 ZNF655Q8N720 491 aaPredicted RBP10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 TRIML2Q8N7C3 387 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 AMER3Q8N944 861 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 OR4A15Q8NGL6 344 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 OR8K5Q8NH50 307 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 UTP15Q8TED0 518 aaKnown RBP10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 ZFP90Q8TF47 636 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 NRG4Q8WWG1 115 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 OR5P2Q8WZ92 322 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 RERGQ96A58 199 aaPredicted RBP10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 FAM120BQ96EK7 910 aaKnown RBP10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 ZDHHC12Q96GR4 267 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 NSMCE2Q96MF7 247 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 TRAPPC9Q96Q05 1148 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 MACROD1Q9BQ69 325 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 CHRNA10Q9GZZ6 450 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 TPT1P8Q9HAU6 139 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 PRDM9Q9NQV7 894 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 C1GALT1Q9NS00 363 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 ACSS1Q9NUB1 689 aaPredicted RBP10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 CCM2LQ9NUG4 571 aaPredicted RBP10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 ARMC1Q9NVT9 282 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 TAS2R9Q9NYW1 312 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 EPHA6Q9UF33 1036 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 TCFL5Q9UL49 500 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 AP4S1Q9Y587 144 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 GTF3C1Q12789 2109 aa10.52□□□□□ -0.73
CSNK1E-202ENST00000366216 IGHV5-51A0A0C4DH38 117 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 A0A0G2JN53 185 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 DHRS12A0PJE2 317 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 H0YGG7 62 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 CPNE3O75131 537 aaKnown RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 C6orf47O95873 294 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 STSP08842 583 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 PVRP15151 417 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 ZNF10P21506 573 aaPredicted RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 CDH3P22223 829 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 IL10P22301 178 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 SESN3P58005 492 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 ARF3P61204 181 aaPredicted RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 HBA1P69905 142 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 ZC3H12BQ5HYM0 836 aaKnown RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 NDUFAF5Q5TEU4 345 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 IRGCQ6NXR0 463 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 ABHD13Q7L211 337 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 MMP21Q8N119 569 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 CARFQ8N187 725 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 C19orf47Q8N9M1 422 aaKnown RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 KCT2Q8NC54 265 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 PAPD5Q8NDF8 572 aaKnown RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 CIDECQ96AQ7 238 aaPredicted RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 SLCO4A1Q96BD0 722 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 AURKBQ96GD4 344 aaPredicted RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 SERINC2Q96SA4 455 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 CD180Q99467 661 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 VCX3BQ9H321 246 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 RAD21L1Q9H4I0 556 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 PIF1Q9H611 641 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 COPS7BQ9H9Q2 264 aaPredicted RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 ZBTB20Q9HC78 741 aaPredicted RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 NEUROD4Q9HD90 331 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 CHST11Q9NPF2 352 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 TEX10Q9NXF1 929 aaPredicted RBP10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 SEMA5BQ9P283 1151 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 USP22Q9UPT9 525 aa10.51□□□□□ -0.73
CSNK1E-202ENST00000366216 RTTNQ86VV8 2226 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 LOC105369274A0A096LPK9 316 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 LOC102723532A0A0G2JNH3 316 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 A0A1W2PR48 441 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 CXCR6O00574 342 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 TXNDC9O14530 226 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 GSTA4O15217 222 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 PDPK1O15530 556 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 P2RX6O15547 441 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 PROM1O43490 865 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 SRPX2O60687 465 aaPredicted RBP10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 KRT75O95678 551 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 STATHP02808 62 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 RAB40ALP0C0E4 278 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 ZNF888P0CJ79 500 aaPredicted RBP10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 EDN3P14138 238 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 ST6GAL1P15907 406 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 NCK1P16333 377 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 HOXB6P17509 224 aaKnown RBP10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 IL1RNP18510 177 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 UQCRC2P22695 453 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 PSMA4P25789 261 aaKnown RBP10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 CERS1P27544 350 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 ALDH9A1P49189 494 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 RAB8AP61006 207 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 BTN3A2P78410 334 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 GAB1Q13480 694 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 ATP1A4Q13733 1029 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 FRMPD2BQ6IN97 320 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 Q6ZS92 163 aa10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 ZNF551Q7Z340 670 aaPredicted RBP10.5□□□□□ -0.73
CSNK1E-202ENST00000366216 CDH24Q86UP0 819 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms