RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SPASTQ9UBP0 616 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 WNT16Q9UBV4 365 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 MRTO4Q9UKD2 239 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 BACE2Q9Y5Z0 518 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 AP1M2Q9Y6Q5 423 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 C9orf170A2RU37 121 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TMEM200CA6NKL6 621 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 OR6C75A6NL08 312 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 HIDE1A8MVS5 230 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 E9PQ18 207 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 IRAK2O43187 625 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 LZTS3O60299 673 aaPredicted RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ICOSLGO75144 302 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PEX11BO96011 259 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 GLUD1P00367 558 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PTBP1P26599 531 aaKnown RBP eCLIP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 CRYBB2P43320 205 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 SH3BP2P78314 561 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ITKQ08881 620 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TWF1Q12792 350 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ECH1Q13011 328 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 NCF4Q15080 339 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PLA1AQ53H76 456 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TXNDC8Q6A555 127 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 C3orf33Q6P1S2 294 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PRR18Q8N4B5 295 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 WDSUB1Q8N9V3 476 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 OR4F6Q8NGB9 312 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ULK4Q96C45 1275 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 BBS4Q96RK4 519 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PITX2Q99697 317 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 NTMT1Q9BV86 223 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 RAD18Q9NS91 495 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 HS3ST4Q9Y661 456 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 GPR171O14626 319 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 LINC00032P0C843 101 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 NR2C1P13056 603 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 VAMP1P23763 118 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 SLC6A1P30531 599 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 SOX3P41225 446 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 RPL34P49207 117 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 GPR143P51810 404 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TBX4P57082 545 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 RPS24P62847 133 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ZNF33AQ06730 810 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ELAVL2Q12926 359 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 HNRNPA0Q13151 305 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PPA1Q15181 289 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 SF3A2Q15428 464 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TIMM50Q3ZCQ8 353 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ZNF628Q5EBL2 1059 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 ASTLQ6HA08 431 aaPredicted RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TMEM91Q6ZNR0 172 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PUSL1Q8N0Z8 303 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 LIX1Q8N485 282 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TRMT10AQ8TBZ6 339 aaKnown RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 HTR3CQ8WXA8 447 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 NT5C3BQ969T7 300 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 KIAA1143Q96AT1 154 aaPredicted RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 GABARAPL1Q9H0R8 117 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 CRLF2Q9HC73 371 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PLCXD1Q9NUJ7 323 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 HCFC1R1Q9NWW0 138 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 TREM2Q9NZC2 230 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 PISDQ9UG56 409 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 POLG2Q9UHN1 485 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 LEF1Q9UJU2 399 aaPredicted RBP8.82□□□□□ -1
SMARCAL1-202ENST00000358207 DHRS7Q9Y394 339 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 USP3Q9Y6I4 520 aa8.82□□□□□ -1
SMARCAL1-202ENST00000358207 MEIKINA0A087WXM9 373 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 UBE2CO00762 179 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 DIRAS1O95057 198 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 CDRT1O95170 752 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 SIX3O95343 332 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-202ENST00000358207 SERPINA1P01009 418 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 ZDHHC11BP0C7U3 371 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 DDX6P26196 483 aaKnown RBP eCLIP8.81□□□□□ -1
SMARCAL1-202ENST00000358207 AVPR2P30518 371 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 CCR1P32246 355 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 PIK3CGP48736 1102 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 ZP1P60852 638 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 RAB33AQ14088 237 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 GK2Q14410 553 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-202ENST00000358207 GPR176Q14439 515 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 HABP2Q14520 560 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-202ENST00000358207 AKIRIN2Q53H80 203 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 AVL9Q8NBF6 648 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 OR2T35Q8NGX2 323 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 RXFP4Q8TDU9 374 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 IGSF8Q969P0 613 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 SLC25A46Q96AG3 418 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 TMEM41AQ96HV5 264 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 LURAP1Q96LR2 239 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 ERMAPQ96PL5 475 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-202ENST00000358207 OR51J1Q9H342 316 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 RIMS4Q9H426 269 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-202ENST00000358207 RHOJQ9H4E5 214 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 IKZF5Q9H5V7 419 aa8.81□□□□□ -1
SMARCAL1-202ENST00000358207 ZNF334Q9HCZ1 680 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-202ENST00000358207 FNDC3AQ9Y2H6 1198 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms