RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 LSMEM2Q8N112 164 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 GALNT15Q8N3T1 639 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 KLHL36Q8N4N3 616 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 OR14A16Q8NHC5 309 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 C1orf216Q8TAB5 229 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 GNPDA2Q8TDQ7 276 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 DPH2Q9BQC3 489 aaPredicted RBP9.19□□□□□ -0.94
GABPA-201ENST00000354828 NANOGQ9H9S0 305 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 SPHK1Q9NYA1 384 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 TAS2R1Q9NYW7 299 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 COMMD3-BMI1R4GMX3 469 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 OR5K3A6NET4 321 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 RFPL3O75679 317 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 OPN1LWP04000 364 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 HNRNPCP07910 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
GABPA-201ENST00000354828 XRCC1P18887 633 aaPredicted RBP9.19□□□□□ -0.94
GABPA-201ENST00000354828 DDCP20711 480 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 RAB25P57735 213 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 VMACQ2NL98 169 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 PYCR3Q53H96 274 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 KLHL17Q6TDP4 642 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 GRAMD2AQ8IUY3 354 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 ZNF595Q8IYB9 648 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 RSC1A1Q92681 617 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 OSTF1Q92882 214 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 ASB9Q96DX5 294 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 L3HYPDHQ96EM0 354 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 HS6ST2Q96MM7 605 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 ZNF559Q9BR84 538 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 CADM1Q9BY67 442 aaKnown RBP9.19□□□□□ -0.94
GABPA-201ENST00000354828 WSB2Q9NYS7 404 aaPredicted RBP9.19□□□□□ -0.94
GABPA-201ENST00000354828 IL37Q9NZH6 218 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 C15orf41Q9Y2V0 281 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 MICAL3Q7RTP6 2002 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 hCG_1807616A0A1W2PRN6 198 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 TLX2O43763 284 aaPredicted RBP9.19□□□□□ -0.94
GABPA-201ENST00000354828 BMP1P13497 986 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 TSPAN5P62079 268 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 PRAMEF8Q5VWM4 474 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 PRAMEF7Q5VXH5 474 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 DHRS13Q6UX07 377 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 SEC14L1Q92503 715 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 UFD1Q92890 307 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 COPS4Q9BT78 406 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 B3GNT4Q9C0J1 378 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 PAIP1Q9H074 479 aaKnown RBP9.19□□□□□ -0.94
GABPA-201ENST00000354828 MRPS2Q9Y399 296 aaKnown RBP9.19□□□□□ -0.94
GABPA-201ENST00000354828 NRXN2Q9P2S2 1712 aa9.19□□□□□ -0.94
GABPA-201ENST00000354828 UBE2QL1A1L167 161 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 FTCDNL1E5RQL4 147 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 KLK10O43240 276 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 TPOP07202 933 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 ETFAP13804 333 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 LHCGRP22888 699 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 TLE3Q04726 772 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 BNIP3Q12983 259 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 TYSND1Q2T9J0 566 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 C6orf52Q5T4I8 152 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 PRAMEF20Q5VT98 475 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 GPR107Q5VW38 600 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 KANK2Q63ZY3 851 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 BICRALQ6AI39 1079 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 MZT2BQ6NZ67 158 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 Q6ZNB5 142 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 UBASH3BQ8TF42 649 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.942e-6■■■□□ 14.8
GABPA-201ENST00000354828 CIDECQ96AQ7 238 aaPredicted RBP9.18□□□□□ -0.94
GABPA-201ENST00000354828 TMEM19Q96HH6 336 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 RBM24Q9BX46 236 aaKnown RBP9.18□□□□□ -0.94
GABPA-201ENST00000354828 SMOC1Q9H4F8 434 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 SP140LQ9H930 580 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 SRA1Q9HD15 236 aaKnown RBP9.18□□□□□ -0.94
GABPA-201ENST00000354828 AGPAT4Q9NRZ5 378 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 SPATA2Q9UM82 520 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 BTBD3Q9Y2F9 522 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 PCDHGA6Q9Y5G7 932 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 SH3PXD2BA1X283 911 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 G3V3Y1 287 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 CSO75390 466 aaKnown RBP9.18□□□□□ -0.94
GABPA-201ENST00000354828 CDH11P55287 796 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 RAB38P57729 211 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 MALLQ13021 153 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 KCNAB1Q14722 419 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 DEFB109BQ30KR1 87 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 CRTC2Q53ET0 693 aaPredicted RBP9.18□□□□□ -0.94
GABPA-201ENST00000354828 KRT74Q7RTS7 529 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 A0A1B0GX78 115 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 A0A1W2PPC1 479 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 J3QLW9 94 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 SOCS2O14508 198 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 SEMA3DO95025 777 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 ZNF19P17023 458 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 FMO3P31513 532 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 TXNL4AP83876 142 aaKnown RBP9.18□□□□□ -0.94
GABPA-201ENST00000354828 TAB1Q15750 504 aa9.18□□□□□ -0.94
GABPA-201ENST00000354828 HENMT1Q5T8I9 393 aaKnown RBP9.18□□□□□ -0.94
GABPA-201ENST00000354828 ZNF534Q76KX8 674 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms