RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TCF19Q9Y242 345 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 KIF3AQ9Y496 699 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PPIP5K1Q6PFW1 1433 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TRIOO75962 3097 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SLIT3O75094 1523 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 RANBP2P49792 3224 aaKnown RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF318Q5VUA4 2279 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CAMSAP2Q08AD1 1489 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 B8ZZF3 427 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PRAC2D3DTV9 90 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 K7ERI5 159 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ABCD4O14678 606 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 EXTL3O43909 919 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TBX19O60806 448 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PROP1O75360 226 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 KRT8P05787 483 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 YES1P07947 543 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 RALAP11233 206 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 FCARP24071 287 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 HMGB2P26583 209 aaKnown RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ABCG1P45844 678 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 BDKRB1P46663 353 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SEC61GP60059 68 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SEC61A1P61619 476 aaKnown RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CBX1P83916 185 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 EWSR1Q01844 656 aaKnown RBP eCLIP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 VGLL4Q14135 290 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZSWIM7Q19AV6 140 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SPATS1Q496A3 300 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 MPPE1Q53F39 396 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ERICH6BQ5W0A0 696 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF730Q6ZMV8 503 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CBWD2Q8IUF1 395 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 KIRREL3Q8IZU9 778 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 FGFRL1Q8N441 504 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 NFAM1Q8NET5 270 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SDR9C7Q8NEX9 313 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 OR13C3Q8NGS6 347 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 OR1L3Q8NH93 324 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 LIPHQ8WWY8 451 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CASP10Q92851 521 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM143Q96AN5 459 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 KIAA1143Q96AT1 154 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 HPDLQ96IR7 371 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 C12orf42Q96LP6 360 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM121Q9BTD3 319 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SIX2Q9NPC8 291 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 RPRD1BQ9NQG5 326 aaKnown RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 FGF21Q9NSA1 209 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TAAR2Q9P1P5 351 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 MRPS2Q9Y399 296 aaKnown RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 UBR5O95071 2799 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 IGLV5-45A0A087WSX0 123 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 A0A1B0GVL5 298 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ESYT2A0FGR8 921 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 FAM74A7A6NL05 159 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 LRRC30A6NM36 301 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 YJEFN3A6XGL0 299 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 C15orf62A8K5M9 175 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 A8MUI8 341 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TULP2O00295 520 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ARPC3O15145 178 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZSCAN12O43309 604 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CLN5O75503 358 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PPP1R3DO95685 299 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SFTPBP07988 381 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 EFNA1P20827 205 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SGSHP51688 502 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ACTR3P61158 418 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CSNK2BP67870 215 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TUBA1BP68363 451 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SSBP2P81877 361 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SNTA1Q13424 505 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SRSF7Q16629 238 aaKnown RBP eCLIP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 BCL7AQ4VC05 210 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 FAM74A3Q4VXF1 159 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TEX35Q5T0J7 233 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 NIPAL3Q6P499 406 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ISCA2Q86U28 154 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PARGQ86W56 976 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 LACC1Q8IV20 430 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TTC5Q8N0Z6 440 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 RNF149Q8NC42 400 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 WDR36Q8NI36 951 aaKnown RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 NTNG2Q96CW9 530 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SENP8Q96LD8 212 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF354BQ96LW1 612 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM43Q9BTV4 400 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 DHX33Q9H6R0 707 aaKnown RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ICAM5Q9UMF0 924 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 IFT52Q9Y366 437 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ANKRD26Q9UPS8 1709 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 RYR2Q92736 4967 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 COL18A1P39060 1754 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 A0A087WUV0 522 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 G3V2L1 256 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 FSHBP01225 129 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CT45A8P0DMV1 189 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CT45A9P0DMV2 189 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 XRCC1P18887 633 aaPredicted RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms