RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TCRBV21S2A2A0A5A6 115 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PITPNM1O00562 1244 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PIRO00625 290 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PHYHO14832 338 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 S100A10P60903 97 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 UFM1P61960 85 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 RPS13P62277 151 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PRRT3Q5FWE3 981 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 EPGNQ6UW88 154 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 B3GNT9Q6UX72 402 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 BOLLQ8N9W6 283 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SCARB1Q8WTV0 552 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 COQ8BQ96D53 544 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 NANOGQ9H9S0 305 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 RNF215Q9Y6U7 377 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 DLG5Q8TDM6 1919 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 C2orf78A6NCI8 922 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 FAM159BA6NKW6 160 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 C9J4A7 227 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 F5H5P2 479 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 CLIC1O00299 241 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SLC1A7O00341 560 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 MRPS14O60783 128 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 LILRB5O75023 590 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 LEFTY1O75610 366 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 MT-ND2P03891 347 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 DCNP07585 359 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 BCKDHAP12694 445 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 APOFQ13790 326 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 ATXN7L3Q14CW9 347 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 ARHGAP11AQ6P4F7 1023 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 BLOC1S3Q6QNY0 202 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 GPRIN1Q7Z2K8 1008 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 GJD3Q8N144 294 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PQLC3Q8N755 202 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 OR1I1O60431 355 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PRAMEF11O60813 436 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 CXCR1P25024 350 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SNTB1Q13884 538 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PTCHD3Q3KNS1 767 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 NFKBIDQ8NI38 313 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 CNOT9Q92600 299 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SHISA4Q96DD7 197 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 CMTM7Q96FZ5 175 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SHDQ96IW2 340 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 TMPRSS5Q9H3S3 457 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 MKKSQ9NPJ1 570 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 HSBP1L1C9JCN9 74 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PCDH17O14917 1159 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PRPS1L1P21108 318 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SCNN1AP37088 669 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PITX1P78337 314 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 GALNT2Q10471 571 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SERINC3Q13530 473 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 KIAA0141Q14154 515 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 NLRC3Q7RTR2 1065 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 LRRC70Q7Z2Q7 622 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 ENTHD1Q8IYW4 607 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 BEST3Q8N1M1 668 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 TTC9Q92623 222 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 TMEM80Q96HE8 168 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 NPY6RQ99463 290 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 COMMD4Q9H0A8 199 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 NDUFS1P28331 727 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 QSOX2Q6ZRP7 698 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 Q6ZVL8 140 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 ADIPOR2Q86V24 386 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 KLHL36Q8N4N3 616 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 POGLUT1Q8NBL1 392 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 CAMKVQ8NCB2 501 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 MALSU1Q96EH3 234 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 EFCAB11Q9BUY7 163 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 POLR2J3Q9H1A7 115 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 ABCG5Q9H222 651 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 NSUN3Q9H649 340 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 C19orf12Q9NSK7 152 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 CCM2LQ9NUG4 571 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 STUB1Q9UNE7 303 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 GRXCR1A8MXD5 290 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 UBFD1O14562 309 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 PRAF2O60831 178 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 UGT2B7P16662 529 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 RFC2P35250 354 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 AGTR2P50052 363 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 RRAS2P62070 204 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 ADAM8P78325 824 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 ENPP2Q13822 863 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 ARHGAP11BQ3KRB8 267 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC29A4Q7RTT9 530 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 TMEM200AQ86VY9 491 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 SKA3Q8IX90 412 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 NAXEQ8NCW5 288 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 LRRC58Q96CX6 371 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 MYRFLQ96LU7 910 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 TRAF4Q9BUZ4 470 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 ATG5Q9H1Y0 275 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 KLRF1Q9NZS2 232 aa10.58□□□□□ -0.72
SMARCE1-202ENST00000348513 A0A087WZY1 265 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms