RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CELA2AP08217 269 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 ACP2P11117 423 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 GPX2P18283 190 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 MAN2A2P49641 1150 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 RASSF2P50749 326 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 SLC37A1P57057 533 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 SLC26A5P58743 744 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 RGNQ15493 299 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 DNAL1Q4LDG9 190 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 EXOSC6Q5RKV6 272 aaKnown RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 C6orf163Q5TEZ5 329 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 MFSD12Q6NUT3 480 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 TNFAIP8L2Q6P589 184 aaPredicted RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 CALHM3Q86XJ0 350 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 FAM156AQ8NDB6 213 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 MORN4Q8NDC4 146 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 OR5D16Q8NGK9 328 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 OR1N1Q8NGS0 311 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 OR10A6Q8NH74 314 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 NCLNQ969V3 563 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 UTP4Q969X6 686 aaKnown RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 IMMP1LQ96LU5 166 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 ZNF583Q96ND8 569 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 MS4A4EQ96PG1 132 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 LPAR4Q99677 370 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 FAM117AQ9C073 453 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 SPAG4Q9NPE6 437 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 CD300AQ9UGN4 299 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 PPIEQ9UNP9 301 aaKnown RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 KCNE3Q9Y6H6 103 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 EPG5Q9HCE0 2579 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 KMT2BQ9UMN6 2715 aaPredicted RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 C15orf38-AP3S2A0A0A6YYH1 394 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 PRORSD1PA6NEY8 169 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 MATN1P21941 496 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 PPIBP23284 216 aaKnown RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 MSX2P35548 267 aaPredicted RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 GSK3BP49841 420 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 KCNJ2P63252 427 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 LIPEQ05469 1076 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 ATP1A1-AS1Q5TC04 95 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 ARPINQ7Z6K5 226 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 APCDD1LQ8NCL9 501 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 B3GNT7Q8NFL0 401 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 OR7G1Q8NGA0 311 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 C16orf52Q8NHV5 167 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 FGF11Q92914 225 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 RAB8BQ92930 207 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 KIAA1143Q96AT1 154 aaPredicted RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 OR51I1Q9H343 314 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 FOLH1BQ9HBA9 442 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 L3MBTL1Q9Y468 752 aa17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 HEMK1Q9Y5R4 338 aaPredicted RBP17.66■□□□□ 0.42
CHMP4A-201ENST00000347519 CHD8Q9HCK8 2581 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 PRAMEF27A3QJZ7 478 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 EVPLLA8MZ36 301 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 TNFRSF21O75509 655 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 OR12D1P0DN82 309 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 SOX11P35716 441 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 PGM1P36871 562 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 MAP3K8P41279 467 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 CRATP43155 626 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 VAC14Q08AM6 782 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 ADRM1Q16186 407 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 PIGGQ5H8A4 983 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 RNF111Q6ZNA4 994 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 MRGPREQ86SM8 312 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 PTOV1Q86YD1 416 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 C9orf40Q8IXQ3 194 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 ZSCAN1Q8NBB4 408 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 SLC16A11Q8NCK7 471 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 HOXB13Q92826 284 aaPredicted RBP17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 SLC35A4Q96G79 324 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 VSTM2LQ96N03 204 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 OR7D2Q96RA2 312 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 ACTRT3Q9BYD9 372 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 SEMA4CQ9C0C4 833 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 ZNF160Q9HCG1 818 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 P4HTMQ9NXG6 502 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 FBXL4Q9UKA2 621 aa17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 PRPF19Q9UMS4 504 aaKnown RBP17.65■□□□□ 0.42
CHMP4A-201ENST00000347519 HMGN4O00479 90 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 DYRK3O43781 588 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 PRAMEF2O60811 474 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 COQ9O75208 318 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 EEFSECP57772 596 aaKnown RBP17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 ZNF155Q12901 538 aaPredicted RBP17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 ATP1A4Q13733 1029 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 DUSP5Q16690 384 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 CDC73Q6P1J9 531 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 PGM2L1Q6PCE3 622 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 NPSR1Q6W5P4 371 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 NDUFAF7Q7L592 441 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 IFNEQ86WN2 208 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 HPS6Q86YV9 775 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 ZZZ3Q8IYH5 903 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 MIPOL1Q8TD10 442 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 ART5Q96L15 291 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 SH3GL1Q99961 368 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms