RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 WDR45BQ5MNZ6 344 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 KLHL17Q6TDP4 642 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 KRT74Q7RTS7 529 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ATP6V1C2Q8NEY4 427 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 OR2T33Q8NG76 320 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ADAMTS19Q8TE59 1207 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 MRPL38Q96DV4 380 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PDXPQ96GD0 296 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SLC23A2Q9UGH3 650 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SCDO00767 359 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PCDH17O14917 1159 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CDRT1O95170 752 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 AK1P00568 194 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 RNF144AP50876 292 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 BNC1Q01954 994 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 GAB1Q13480 694 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 Q6ZSR6 202 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PAPD5Q8NDF8 572 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 HMGCLL1Q8TB92 370 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 MMP27Q9H306 513 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 NKIRAS2Q9NYR9 191 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CLEC4AQ9UMR7 237 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SCN3AQ9NY46 2000 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ANKRD36A6QL64 1941 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PLOD3O60568 738 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 TNFRSF21O75509 655 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CSTAP01040 98 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 NRMQ8IXM6 262 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 FAM217AQ8IXS0 508 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 MRGPRX3Q96LB0 322 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SECISBP2Q96T21 854 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ASPNQ9BXN1 380 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 IGLV3-16A0A075B6K0 115 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 AGAP14A8MT82 685 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SOX30O94993 753 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ACVR2AP27037 513 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SLC5A2P31639 672 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PBX2P40425 430 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 KCNJ5P48544 419 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 EPHA5P54756 1037 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 OR51A7Q8NH64 312 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 OR1E3Q8WZA6 343 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SPRTNQ9H040 489 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CPNE7Q9UBL6 633 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 GBF1Q92538 1859 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PROS1P07225 676 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 AHRP35869 848 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 MLLT10P55197 1068 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF691Q5VV52 312 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CCDC80Q76M96 950 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF550Q7Z398 422 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 POT1Q9NUX5 634 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ARID1BQ8NFD5 2236 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 AP1G1O43747 822 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PCDHGA12O60330 932 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF3P17036 446 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 NCS1P62166 190 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 EMX1Q04741 257 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SMN1Q16637 294 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PUS10Q3MIT2 529 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SLC29A4Q7RTT9 530 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 RBM12BQ8IXT5 1001 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF707Q96C28 371 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 RACGAP1Q9H0H5 632 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 NAALAD2Q9Y3Q0 740 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 A0A0A6YYC8 382 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 BLOC1S5-TXNDC5H3BN57 136 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 I3L1I5 382 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 BCAS1O75363 584 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 RDH16O75452 317 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 STAT5AP42229 794 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 HNRNPKP61978 463 aaKnown RBP eCLIP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 NLRP8Q86W28 1048 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 MOSPD2Q8NHP6 518 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 TOE1Q96GM8 510 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 TGM7Q96PF1 710 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 TRIM2Q9C040 744 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 MALT1Q9UDY8 824 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CD207Q9UJ71 328 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SCN2AQ99250 2005 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 A0A0J9YY10 115 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SMIM30A4D0T7 59 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 KHNYNO15037 678 aaKnown RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 RAB36O95755 333 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF823P16415 610 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CTHP32929 405 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 DEFB133Q30KQ1 61 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 Q6ZPB1 254 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CDADC1Q9BWV3 514 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 POM121BA6NF01 834 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SERPINA3P01011 423 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 ITGB8P26012 769 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 CCKBRP32239 447 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 KIAA0040Q15053 153 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 NDUFAF6Q330K2 333 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 RNF111Q6ZNA4 994 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 PRODH2Q9UF12 536 aa5.95□□□□□ -1.46
PRKDC-202ENST00000338368 SDC3O75056 442 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 APOL3O95236 402 aa5.94□□□□□ -1.46
PRKDC-202ENST00000338368 SLC15A1P46059 708 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms