RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SLC6A17Q9H1V8 727 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 GABRQQ9UN88 632 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 OARD1Q9Y530 152 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 H7BY64 318 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 LEFTY2O00292 366 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 GATBO75879 557 aaKnown RBP15.3■□□□□ 0.04
NPHP3-201ENST00000337331 CD2P06729 351 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 TNFRSF1BP20333 461 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ERVPABLB-1P60509 514 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 ST3GAL3Q11203 375 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PPIGQ13427 754 aaKnown RBP eCLIP15.3■□□□□ 0.043e-7■■■■□ 26
NPHP3-201ENST00000337331 SAXO2Q658L1 398 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 TTC9BQ8N6N2 239 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 FAM46DQ8NEK8 389 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 C1orf216Q8TAB5 229 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PRAP1Q96NZ9 151 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PCTPQ9UKL6 214 aa15.3■□□□□ 0.04
NPHP3-201ENST00000337331 PRMT3O60678 531 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 KRT33AO76009 404 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 HLA-DPB1P04440 258 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 FGF4P08620 206 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 CBR1P16152 277 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 SNTB2Q13425 540 aaKnown RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 HSDL2Q6YN16 418 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 NLRP8Q86W28 1048 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 TCTE3Q8IZS6 198 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF454Q8N9F8 522 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 GRHL3Q8TE85 626 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 SLC22A18Q96BI1 424 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 PGAP3Q96FM1 320 aaPredicted RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 IGSF21Q96ID5 467 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 ARL5BQ96KC2 179 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 PSORS1C1Q9UIG5 152 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 SOD2P04179 222 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 PCMT1P22061 227 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 ARF5P84085 180 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 LMAN2Q12907 356 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 OPCMLQ14982 345 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 HES5Q5TA89 166 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 LINC00469Q8N7U9 141 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 ZFR2Q9UPR6 939 aaKnown RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 MYO7AQ13402 2215 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 USP54Q70EL1 1684 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 SMAD9O15198 467 aaKnown RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 LEFTY1O75610 366 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 BTN3A2P78410 334 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 ASAH1Q13510 395 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 TEAD2Q15562 447 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 DCUN1D3Q8IWE4 304 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 L3HYPDHQ96EM0 354 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 QRSL1Q9H0R6 528 aaKnown RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 METTL17Q9H7H0 456 aaPredicted RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 MKKSQ9NPJ1 570 aaPredicted RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 PRELID3BQ9Y3B1 194 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 MARF1Q9Y4F3 1742 aaKnown RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 C2orf78A6NCI8 922 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 SIX6O95475 246 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 RETP07949 1114 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 ZNF14P17017 642 aaPredicted RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 PTNP21246 168 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 RORAP35398 523 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 GNALP38405 381 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 EPHA5P54756 1037 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 C18orf21Q32NC0 220 aaPredicted RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 RTP2Q5QGT7 225 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 TMEM179BQ7Z7N9 219 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 ZFP82Q8N141 532 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 RADILQ96JH8 1075 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 MCCC1Q96RQ3 725 aaPredicted RBP15.29■□□□□ 0.04
NPHP3-201ENST00000337331 PRDM9Q9NQV7 894 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 MARK1Q9P0L2 795 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 MED31Q9Y3C7 131 aa15.29■□□□□ 0.04
NPHP3-201ENST00000337331 TO15178 435 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 TFP02787 698 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 SBK3P0C264 359 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 NPR2P20594 1047 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 CNR2P34972 360 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 CDKN1CP49918 316 aaPredicted RBP15.28■□□□□ 0.04
NPHP3-201ENST00000337331 DOC2AQ14183 400 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 KLHL24Q6TFL4 600 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 NDRG2Q9UN36 371 aaKnown RBP15.28■□□□□ 0.04
NPHP3-201ENST00000337331 SOCS7O14512 581 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 MAOBP27338 520 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 DNASE1L1P49184 302 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 CAPZA1P52907 286 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 SLC3A1Q07837 685 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 GINS1Q14691 196 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 ATXN7L3Q14CW9 347 aaPredicted RBP15.28■□□□□ 0.04
NPHP3-201ENST00000337331 LIPJQ5W064 366 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 GRASPQ7Z6J2 395 aaPredicted RBP15.28■□□□□ 0.04
NPHP3-201ENST00000337331 SCD5Q86SK9 330 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 PDZD3Q86UT5 571 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 LINC00471Q8N535 108 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 FBXO15Q8NCQ5 510 aaPredicted RBP15.28■□□□□ 0.04
NPHP3-201ENST00000337331 DENND6BQ8NEG7 585 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 BOCQ9BWV1 1114 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 ARHGAP39Q9C0H5 1083 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 DNAJC25-GNG10A0A024R161 153 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 ACRV1P26436 265 aa15.28■□□□□ 0.04
NPHP3-201ENST00000337331 ACVR2AP27037 513 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms