RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 NDUFAF4Q9P032 175 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 TRAPPC4Q9Y296 219 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 TMEM200CA6NKL6 621 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 PCDH7O60245 1069 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 PRMT2P55345 433 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 NAE1Q13564 534 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 HFEQ30201 348 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 TCTE1Q5JU00 501 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 MORN1Q5T089 497 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 HES5Q5TA89 166 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 SLC25A25Q6KCM7 469 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 NCEH1Q6PIU2 408 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 FAM198BQ6UWH4 519 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 HMGN2P46Q86SG4 172 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 YIPF5Q969M3 257 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 P2RY13Q9BPV8 354 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 DUSP26Q9BV47 211 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 LDAHQ9H6V9 325 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 ZDHHC4Q9NPG8 344 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 NLGN3Q9NZ94 848 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 MBD1Q9UIS9 605 aaPredicted RBP11.25□□□□□ -0.61
LIMK2-202ENST00000333611 STUB1Q9UNE7 303 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 KLK4Q9Y5K2 254 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 KCNMB2Q9Y691 235 aa11.25□□□□□ -0.61
LIMK2-202ENST00000333611 DOCK4Q8N1I0 1966 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 LOC285556D6RIA3 1793 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ANXA2P2A6NMY6 339 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 SLC43A1O75387 559 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 MT-ND4P03905 459 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ANXA4P09525 319 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PRPS2P11908 318 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ELNP15502 786 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PCSK2P16519 638 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PTAFRP25105 342 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 DDX6P26196 483 aaKnown RBP eCLIP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 CCR7P32248 378 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF157P51786 506 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 CLDN20P56880 219 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 INSL4Q14641 139 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 CPTPQ5TA50 214 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PRAMEF13Q5VWM6 474 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 SLC24A5Q71RS6 500 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 TCEANCQ8N8B7 351 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ZC3H10Q96K80 434 aaKnown RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 GPR137Q96N19 417 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PKP4Q99569 1192 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 TMEM43Q9BTV4 400 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 DPH7Q9BTV6 452 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 HHATLQ9HCP6 504 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 CTPS2Q9NRF8 586 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF69Q9UC07 566 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 GREB1Q4ZG55 1949 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 E9PI62 339 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 POP7O75817 140 aaKnown RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 TFP02787 698 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 IGFBP1P08833 259 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 CD63P08962 238 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF3P17036 446 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ACVR2AP27037 513 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 CHI3L1P36222 383 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 GGT2P36268 569 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 GSTM5P46439 218 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 STK19P49842 368 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.611e-7■■□□□ 13.6
LIMK2-202ENST00000333611 ATXN7L3Q14CW9 347 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 SEC23BQ15437 767 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ADGRF1Q5T601 910 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 FUT10Q6P4F1 479 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PDZD9Q8IXQ8 264 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 SAMD12Q8N8I0 201 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 GPR26Q8NDV2 337 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 SLC38A3Q99624 504 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 TEX12Q9BXU0 123 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 NXF2Q9GZY0 626 aaKnown RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ZDHHC6Q9H6R6 413 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 TXNL4BQ9NX01 149 aaKnown RBP11.24□□□□□ -0.61
LIMK2-202ENST00000333611 MGAT4CQ9UBM8 478 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 MAFFQ9ULX9 164 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 PCDHGB3Q9Y5G1 929 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 FKBP7Q9Y680 259 aa11.24□□□□□ -0.61
LIMK2-202ENST00000333611 ARHGEF33A8MVX0 844 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 C4BPBP20851 252 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 XPAP23025 273 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ACRV1P26436 265 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 G0S2P27469 103 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 MMP12P39900 470 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ARFIP1P53367 373 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ITGA1P56199 1179 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 RING1Q06587 406 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 IQCF1Q8N6M8 205 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 CREB3L4Q8TEY5 395 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 OR10A4Q9H209 315 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 DPAGT1Q9H3H5 408 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 GPR31O00270 319 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 RFXAPO00287 272 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms