RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GID4Q8IVV7 300 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 SERINC2Q96SA4 455 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 SEC14L4Q9UDX3 406 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 ATXN7L1Q9ULK2 861 aaPredicted RBP12.33□□□□□ -0.44
VSTM4-202ENST00000332853 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 LCKP06239 509 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 GSTM2P28161 218 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 CBLBQ13191 982 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 C1orf94Q6P1W5 598 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 KLHL31Q9H511 634 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 KIAA1217Q5T5P2 1943 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 A8MV72 311 aaPredicted RBP12.33□□□□□ -0.44
VSTM4-202ENST00000332853 OXSR1O95747 527 aaPredicted RBP12.33□□□□□ -0.44
VSTM4-202ENST00000332853 GMFBP60983 142 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 PLBD1Q6P4A8 553 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 OR8H1Q8NGG4 311 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 NEIL3Q8TAT5 605 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 CXXC1Q9P0U4 656 aaPredicted RBP12.33□□□□□ -0.44
VSTM4-202ENST00000332853 DKKL1Q9UK85 242 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 ZFR2Q9UPR6 939 aaKnown RBP12.33□□□□□ -0.44
VSTM4-202ENST00000332853 LOC100509620A0A075B734 347 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 A0A0A6YYC8 382 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 I3L1I5 382 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NDUFV2P19404 249 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 METTL2BQ6P1Q9 378 aaKnown RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 TSPYL5Q86VY4 417 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 PRR22Q8IZ63 422 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 OR52E2Q8NGJ4 325 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 OR8J1Q8NGP2 316 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 CDS1Q92903 461 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 CHFRQ96EP1 664 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 MYNNQ9NPC7 610 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 K7ESM1 405 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 HMGN2P05204 90 aaKnown RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 PROS1P07225 676 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 SPHARQ15513 63 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NSDHLQ15738 373 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NDUFA5Q16718 116 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ARMC10Q8N2F6 343 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 PSD4Q8NDX1 1056 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NPLQ9BXD5 320 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 HDHD5Q9BXW7 423 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 DPH1Q9BZG8 443 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 GORASP2Q9H8Y8 452 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 BEX1Q9HBH7 125 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 DIABLOQ9NR28 239 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 HCN2Q9UL51 889 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 PCDHA9Q9Y5H5 950 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 COL4A5P29400 1685 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 MAGEA12P43365 314 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ADAM8P78325 824 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 SHISA6Q6ZSJ9 500 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 DCP2Q8IU60 420 aaKnown RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NSMAFQ92636 917 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 GATA6Q92908 595 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 TUBB1Q9H4B7 451 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 C19orf25Q9UFG5 118 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 PLGP00747 810 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 GSTT2BP0CG30 244 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 HNRNPKP61978 463 aaKnown RBP eCLIP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 MRPL58Q14197 206 aaKnown RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 TMEM164Q5U3C3 297 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 FAM219BQ5XKK7 198 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
VSTM4-202ENST00000332853 PMM1Q92871 262 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NELL2Q99435 816 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 TMEM165Q9HC07 324 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NUP205Q92621 2012 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 KCNJ13O60928 360 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 GABARAPL2P60520 117 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF33BQ06732 778 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ERV3-1Q14264 604 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ALG10BQ5I7T1 473 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 LHX8Q68G74 356 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 DNM1P34Q6PK57 102 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF101Q8IZC7 436 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF740Q8NDX6 193 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 OR4K13Q8NH42 304 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NDNFQ8TB73 568 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 TFAP2CQ92754 450 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 NAALAD2Q9Y3Q0 740 aa12.32□□□□□ -0.44
VSTM4-202ENST00000332853 APOFQ13790 326 aa12.31□□□□□ -0.44
VSTM4-202ENST00000332853 EXOSC7Q15024 291 aaKnown RBP12.31□□□□□ -0.44
VSTM4-202ENST00000332853 LPAL2Q16609 132 aa12.31□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF517Q6ZMY9 492 aaPredicted RBP12.31□□□□□ -0.44
VSTM4-202ENST00000332853 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
VSTM4-202ENST00000332853 OR5K2Q8NHB8 316 aa12.31□□□□□ -0.44
VSTM4-202ENST00000332853 ISL2Q96A47 359 aa12.31□□□□□ -0.44
VSTM4-202ENST00000332853 GPR78Q96P69 363 aa12.31□□□□□ -0.44
VSTM4-202ENST00000332853 ZNF300Q96RE9 604 aaPredicted RBP12.31□□□□□ -0.44
VSTM4-202ENST00000332853 ALOXE3Q9BYJ1 711 aa12.31□□□□□ -0.44
VSTM4-202ENST00000332853 MTHFD2LQ9H903 347 aaPredicted RBP12.31□□□□□ -0.44
VSTM4-202ENST00000332853 MCM3APO60318 1980 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms