RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 A0A1W2PQL4 384 aaPredicted RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 WASHC1A8K0Z3 465 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 FAM47E-STBD1D6RA91 191 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 RGS13O14921 159 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 PPM1DO15297 605 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 IDH3BO43837 385 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 CLEC2LP0C7M8 214 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 NR2F6P10588 404 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 DRD2P14416 443 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 SSR2P43308 183 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 SLC6A11P48066 632 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 NCBP2P52298 156 aaKnown RBP eCLIP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 WNT4P56705 351 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 TAB1Q15750 504 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 UAP1L1Q3KQV9 507 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 C3orf38Q5JPI3 329 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 ENTPD8Q5MY95 495 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 WASH2PQ6VEQ5 465 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 UTS2BQ765I0 119 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 ADCK2Q7Z695 626 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 SFTPA1Q8IWL2 248 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 FAM181AQ8N9Y4 354 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 PRRC1Q96M27 445 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 MTIF3Q9H2K0 278 aaKnown RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 IGFLR1Q9H665 355 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 MARCH7Q9H992 704 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 BCL2L10Q9HD36 194 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 SLC35C2Q9NQQ7 365 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 PLEKHB1Q9UF11 243 aaPredicted RBP14.48□□□□□ -0.09
BRCC3-201ENST00000330045 RWDD3Q9Y3V2 267 aa14.48□□□□□ -0.09
BRCC3-201ENST00000330045 GSTM3P21266 225 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 BUD31P41223 144 aaPredicted RBP14.47□□□□□ -0.09
BRCC3-201ENST00000330045 KHKP50053 298 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 CSNK1G2P78368 415 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 OR2G6Q5TZ20 316 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 XKRXQ6PP77 449 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 ADAMTSL4Q6UY14 1074 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 GATAD2AQ86YP4 633 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 TP53I13Q8NBR0 393 aaPredicted RBP14.47□□□□□ -0.09
BRCC3-201ENST00000330045 KCTD7Q96MP8 289 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 C17orf62Q9BQA9 187 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 YIPF4Q9BSR8 244 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 MIXL1Q9H2W2 232 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 NKX2-4Q9H2Z4 354 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 DDX28Q9NUL7 540 aaKnown RBP14.47□□□□□ -0.09
BRCC3-201ENST00000330045 C2orf16Q68DN1 1984 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 FABP12A6NFH5 140 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 STK25O00506 426 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 APOL3O95236 402 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 PCCBP05166 539 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 CHRM4P08173 479 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 ACP2P11117 423 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 SLC9A3P48764 834 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 GAS1P54826 345 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 ERVK-21P61565 698 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 GPR19Q15760 415 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 PLK5Q496M5 336 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 HSDL2Q6YN16 418 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 ETFBKMTQ8IXQ9 262 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 LINC01555Q8NAE3 123 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 C1GALT1C1Q96EU7 318 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 DIRAS2Q96HU8 199 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 BBS4Q96RK4 519 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 PHOX2BQ99453 314 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 LGR4Q9BXB1 951 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 PLA2G12AQ9BZM1 189 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 EGLN3Q9H6Z9 239 aa14.47□□□□□ -0.09
BRCC3-201ENST00000330045 MRPS18AQ9NVS2 196 aaKnown RBP14.47□□□□□ -0.09
BRCC3-201ENST00000330045 YARS2Q9Y2Z4 477 aaKnown RBP14.47□□□□□ -0.09
BRCC3-201ENST00000330045 MUC22E2RYF6 1773 aaPredicted RBP14.46□□□□□ -0.09
BRCC3-201ENST00000330045 CKAP5Q14008 2032 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 MEIOCA2RUB1 952 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 GLOD5A6NK44 160 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 PRODHO43272 600 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 CLEC3AO75596 197 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 HNRNPA1P09651 372 aaKnown RBP eCLIP14.46□□□□□ -0.09
BRCC3-201ENST00000330045 NTSP30990 170 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 SDC2P34741 201 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 DAB2P98082 770 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 RAB40BQ12829 278 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 PDZK1Q5T2W1 519 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 ZNF793Q6ZN11 406 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 RTL10Q7L3V2 364 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 KIF18BQ86Y91 864 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 SUN3Q8TAQ9 357 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 TMEM163Q8TC26 289 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 GATAD2BQ8WXI9 593 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 TM9SF4Q92544 642 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 SLC9A6Q92581 669 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 TP53INP1Q96A56 240 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 RNFT2Q96EX2 444 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 ST6GAL2Q96JF0 529 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 SNX18Q96RF0 628 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 FAIM2Q9BWQ8 316 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 SLC22A4Q9H015 551 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 FGF20Q9NP95 211 aaPredicted RBP14.46□□□□□ -0.09
BRCC3-201ENST00000330045 ZDHHC4Q9NPG8 344 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 COL4A3Q01955 1670 aa14.46□□□□□ -0.09
BRCC3-201ENST00000330045 DENND4AQ7Z401 1863 aa14.46□□□□□ -0.1
BRCC3-201ENST00000330045 TMEM129A0AVI4 362 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms