RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 BTN3A1O00481 513 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 EEF1E1O43324 174 aaKnown RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 CCNT2O60583 730 aaKnown RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 COQ9O75208 318 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 S100BP04271 92 aaPredicted RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 CHRM3P20309 590 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 ZFP36P26651 326 aaKnown RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 CYB561P49447 251 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 MAN2A2P49641 1150 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 ARFIP1P53367 373 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 IL13RA1P78552 427 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 TRAF3Q13114 568 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 GRM7Q14831 915 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 LSM12Q3MHD2 195 aaKnown RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 SLC9B1Q4ZJI4 515 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 BEX5Q5H9J7 111 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 DNAJC14Q6Y2X3 702 aaPredicted RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 MSANTD1Q6ZTZ1 278 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 TTLL10Q6ZVT0 673 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 CPNE9Q8IYJ1 553 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 TEX29Q8N6K0 151 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 GOLM1Q8NBJ4 401 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 NAXEQ8NCW5 288 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 OR2L2Q8NH16 312 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 OR56A3Q8NH54 315 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 HM13Q8TCT9 377 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 POP5Q969H6 163 aaKnown RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 SPDL1Q96EA4 605 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 DCUN1D1Q96GG9 259 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 CCDC138Q96M89 665 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 ZFP3Q96NJ6 502 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 EBF4Q9BQW3 602 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 TMEM79Q9BSE2 394 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 ARL8BQ9NVJ2 186 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 ZIM2Q9NZV7 527 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 C19orf25Q9UFG5 118 aaPredicted RBP6.08□□□□□ -1.44
CSTF3-201ENST00000323959 PCDHB10Q9UN67 800 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 MAPRE3Q9UPY8 281 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 COLEC10Q9Y6Z7 277 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
CSTF3-201ENST00000323959 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 MBD3L3A6NE82 208 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 NPEPPSL1A6NEC2 478 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TIMM23O14925 209 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 GSC2O15499 205 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 BUD23O43709 281 aaKnown RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 ZNF354AO60765 605 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 ANXA5P08758 320 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 CCND1P24385 295 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 ELF3P78545 371 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 KLF10Q13118 480 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 MAD2L1Q13257 205 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 FXNQ16595 210 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 ACSBG2Q5FVE4 666 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TCTE1Q5JU00 501 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 LIPJQ5W064 366 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 CRTC3Q6UUV7 619 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 NET1Q7Z628 596 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TREML1Q86YW5 311 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SCUBE1Q8IWY4 988 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TNIP2Q8NFZ5 429 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 MBD3L2Q8NHZ7 208 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SCAMP4Q969E2 229 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 UTP4Q969X6 686 aaKnown RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 ROPN1LQ96C74 230 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 DUS3LQ96G46 650 aaKnown RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 HS3ST6Q96QI5 342 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 NPAS2Q99743 824 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TMEM204Q9BSN7 226 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SPATA16Q9BXB7 569 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TRIM54Q9BYV2 358 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 OR2AG1Q9H205 316 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 NT5DC2Q9H857 520 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SLC52A3Q9NQ40 469 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SDR39U1Q9NRG7 319 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SPATA7Q9P0W8 599 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 DCTN4Q9UJW0 460 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 WDR37Q9Y2I8 494 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TMED5Q9Y3A6 229 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 DNAJC15Q9Y5T4 150 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SPTBP11277 2137 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 FAM234BA2RU67 622 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 FITM1A5D6W6 292 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SUPT3HB4E1H0 165 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SLC28A1O00337 649 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 OR7A17O14581 309 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 AHCYL1O43865 530 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SUPT3HO75486 399 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 PDE9AO76083 593 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 HEXBP07686 556 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 IDO1P14902 403 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 ACADLP28330 430 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 SERPINB1P30740 379 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 GSTM5P46439 218 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 PPIAP62937 165 aaKnown RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 TMEM115Q12893 351 aaPredicted RBP6.07□□□□□ -1.44
CSTF3-201ENST00000323959 GTF2H2Q13888 395 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 FAM214AQ32MH5 1076 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 GTF2H2CQ6P1K8 395 aa6.07□□□□□ -1.44
CSTF3-201ENST00000323959 GPRIN3Q6ZVF9 776 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms