RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ZNF419Q96HQ0 510 aaPredicted RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.12■□□□□ 0.17
SMCHD1-201ENST00000320876 ARGFXA6NJG6 315 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 F7P08709 466 aaPredicted RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 HOXD12P35452 270 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ARL6IP1Q15041 203 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 CNIH2Q6PI25 160 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ENPP6Q6UWR7 440 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 HDHD5Q9BXW7 423 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 PER3P56645 1201 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 VSX2P58304 361 aaPredicted RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 TPRG1Q6ZUI0 275 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 NDNFQ8TB73 568 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ELMOD3Q96FG2 381 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 MRPL15Q9P015 296 aaKnown RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF705GA8MUZ8 300 aaPredicted RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 FTCDNL1E5RQL4 147 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 TP53I11O14683 189 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 GABRA3P34903 492 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 C7orf43Q8WVR3 580 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ABRACLQ9P1F3 81 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 LCN8Q6JVE9 175 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 WDR20Q8TBZ3 569 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 BCO2Q9BYV7 579 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 CBLP22681 906 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ACRV1P26436 265 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 SLAMF1Q13291 335 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 PPA1Q15181 289 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 SF3A2Q15428 464 aaKnown RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 SGPP2Q8IWX5 399 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 RCBTB1Q8NDN9 531 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 C3orf49Q96BT1 292 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 TSPAN10Q9H1Z9 355 aaPredicted RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 EMC8O43402 210 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF136P52737 540 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 FAM214AQ32MH5 1076 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 RBCK1Q9BYM8 510 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 SLC28A3Q9HAS3 691 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 FBXL12Q9NXK8 326 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 PLAGL1Q9UM63 463 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF142P52746 1687 aaPredicted RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 LDB2O43679 373 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 POP7O75817 140 aaKnown RBP16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 GGT5P36269 586 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 UBE2UQ5VVX9 321 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 TMPPEQ6ZT21 453 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 PGAP1Q75T13 922 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 SH3RF2Q8TEC5 729 aa16.11■□□□□ 0.17
SMCHD1-201ENST00000320876 CNOT4O95628 575 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 ARNTL2Q8WYA1 636 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 GPRC5BQ9NZH0 403 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 ENPP5Q9UJA9 477 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 IGLV3-22A0A075B6J6 115 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF736B4DX44 427 aaPredicted RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 H3BMQ9 156 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 SCAMP1O15126 338 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 GNB3P16520 340 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 GBX1Q14549 363 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 COG8Q96MW5 612 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 ARVCFO00192 962 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 UBBP0CG47 229 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 UBCP0CG48 685 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 RPS27AP62979 156 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 UBA52P62987 128 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 NKX3-2P78367 333 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 GRIN2CQ14957 1233 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 WDR45BQ5MNZ6 344 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 PRRT1Q99946 306 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 OR51J1Q9H342 316 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 REV1Q9UBZ9 1251 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 NDRG2Q9UN36 371 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 SCN11AQ9UI33 1791 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 ACOT7O00154 380 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 CAV2P51636 162 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 DGKZQ13574 1117 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 HEXBP07686 556 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 GPR4P46093 362 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 MEF2DQ14814 521 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 SUSD1Q6UWL2 747 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 RPS27LQ71UM5 84 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 ANKRD60Q9BZ19 345 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 AK1P00568 194 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 BMP2P12643 396 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 IRF2P14316 349 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 GGT1P19440 569 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 AFF3P51826 1226 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 EIF4HQ15056 248 aaKnown RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 SGCAQ16586 387 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 UGT3A2Q3SY77 523 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 ZNF578Q96N58 590 aaPredicted RBP16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 PITX2Q99697 317 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 NR4A2P43354 598 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 UBE2NLQ5JXB2 153 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 AGAP7PQ5VUJ5 663 aa16.1■□□□□ 0.17
SMCHD1-201ENST00000320876 AGAP6Q5VW22 663 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms