RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 PCDHAC1Q9H158 963 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 C1orf21Q9H246 121 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 ALG2Q9H553 416 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 PTGFRNQ9P2B2 879 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 COPS7AQ9UBW8 275 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 MSRB2Q9Y3D2 182 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 IGHV1-45A0A0A0MS14 117 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 SAGE2PA6NJ88 616 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 CREG1O75629 220 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 CLPSP04118 112 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 AQP1P29972 269 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 MVDP53602 400 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 MAP4K2Q12851 820 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 PCOLCEQ15113 449 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 DNAL1Q4LDG9 190 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 IGF2-ASQ6U949 168 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 HACD2Q6Y1H2 254 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 MED25Q71SY5 747 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 ASRGL1Q7L266 308 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 YTHDF3Q7Z739 585 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 OR56A1Q8NGH5 318 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 OR14A16Q8NHC5 309 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 NEURL3Q96EH8 262 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 FBXL20Q96IG2 436 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 GPR87Q9BY21 358 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 ITPAQ9BY32 194 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 KAT8Q9H7Z6 458 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 FAF1Q9UNN5 650 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 C19orf53Q9UNZ5 99 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 CHD8Q9HCK8 2581 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 IGF2RP11717 2491 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 ATMQ13315 3056 aa14.32□□□□□ -0.12
PDLIM5-202ENST00000318007 NSG1A0A0A6YYJ2 146 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 TRBV11-1A0A0K0K1C0 115 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 PLOD2O00469 737 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 NKX2-8O15522 239 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 PLOD3O60568 738 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 ADRB1P08588 477 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 ZCCHC18P0CG32 403 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 NCK1P16333 377 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 EMDP50402 254 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 RNF144AP50876 292 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 SLC37A1P57057 533 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 CHAF1BQ13112 559 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 SSPNQ14714 243 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 CCNJQ5T5M9 372 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 FCRLBQ6BAA4 426 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 MFSD12Q6NUT3 480 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 RNF111Q6ZNA4 994 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 C9orf40Q8IXQ3 194 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 B3GNT7Q8NFL0 401 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 OR4N2Q8NGD1 307 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 OR8J3Q8NGG0 315 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 CDS1Q92903 461 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 PHF12Q96QT6 1004 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 LMF1Q96S06 567 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 PELOQ9BRX2 385 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 B3GNT4Q9C0J1 378 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 P4HTMQ9NXG6 502 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 NDE1Q9NXR1 346 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 TMEM181Q9P2C4 612 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 FBXL4Q9UKA2 621 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 PRAMEF2O60811 474 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 HNRNPCL1O60812 293 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 DNAJA2O60884 412 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 NPPAP01160 153 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 PRIM2P49643 509 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 GSK3BP49841 420 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 FUT7Q11130 342 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 RAPSNQ13702 412 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 RPS26P11Q5JNZ5 115 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 TMEM64Q6YI46 380 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 MRGPREQ86SM8 312 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 ULK2Q8IYT8 1036 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 PRR22Q8IZ63 422 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 APCDD1LQ8NCL9 501 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 HIPK4Q8NE63 616 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 OR52N2Q8NGI0 321 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 OR1N1Q8NGS0 311 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 GPR151Q8TDV0 419 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 KCNE4Q8WWG9 221 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 FGF11Q92914 225 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 UTP4Q969X6 686 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 OR7D2Q96RA2 312 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 KCTD14Q9BQ13 255 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 EPS8L2Q9H6S3 715 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 FOLH1BQ9HBA9 442 aa14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF223Q9UK11 482 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 HEMK1Q9Y5R4 338 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-202ENST00000318007 APC2O95996 2303 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 HMGN4O00479 90 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 KRT75O95678 551 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 IGKV3-11P04433 115 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 BCHEP06276 602 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 ACP2P11117 423 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 SLC26A5P58743 744 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 DUSP5Q16690 384 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 BHLHB9Q6PI77 547 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF615Q8N8J6 731 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms