RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 SDC1P18827 310 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 MMP12P39900 470 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 PREPP48147 710 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 BTN3A2P78410 334 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 BDH1Q02338 343 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 PDE7AQ13946 482 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 COL28A1Q2UY09 1125 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 XKR7Q5GH72 579 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CES4AQ5XG92 561 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 DPY19L2P1Q6NXN4 242 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 TRIM46Q7Z4K8 759 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 DCP2Q8IU60 420 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 SLC15A4Q8N697 577 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ACOT11Q8WXI4 607 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 ZNF486Q96H40 463 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 SLCO5A1Q9H2Y9 848 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 IL26Q9NPH9 171 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 GKN1Q9NS71 199 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SLC35A3Q9Y2D2 325 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 MYO5AQ9Y4I1 1855 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 GJE1A6NN92 205 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 PCDHGA12O60330 932 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CSTBP04080 98 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 CA5AP35218 305 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ERVPABLB-1P60509 514 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 WDR5P61964 334 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 BLOC1S1P78537 153 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ARFRP1Q13795 201 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 VASH1Q7L8A9 365 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 CEACAM19Q7Z692 300 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CMIPQ8IY22 773 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 TMEM102Q8N9M5 508 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 OR2L3Q8NG85 312 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 HAPLN2Q9GZV7 340 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 TMEM38AQ9H6F2 299 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 FBXL12Q9NXK8 326 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SERTAD3Q9UJW9 196 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 HS3ST2Q9Y278 367 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ATXN1LP0C7T5 689 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 GPR50Q13585 617 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CHRFAM7AQ494W8 412 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ACTBL2Q562R1 376 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 LY6G5CQ5SRR4 150 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 AGAP7PQ5VUJ5 663 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 LPCAT3Q6P1A2 487 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 KIAA1958Q8N8K9 716 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SH3YL1Q96HL8 342 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 DMRT3Q9NQL9 472 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 FAM86C1Q9NVL1 165 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 OSER1Q9NX31 292 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 POLHQ9Y253 713 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 NHSQ6T4R5 1651 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 MAN2B1O00754 1011 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 OR2B3O76000 313 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 RAB40ALP0C0E4 278 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 ACP2P11117 423 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 CKMT1AP12532 417 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 PYCR1P32322 319 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 MAP2K4P45985 399 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 TOMM20Q15388 145 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 DUSP6Q16828 381 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 CRTC1Q6UUV9 634 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 ZNF615Q8N8J6 731 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 COQ8AQ8NI60 647 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 RAB40AQ8WXH6 277 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 ASB15Q8WXK1 588 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 KLHL15Q96M94 604 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 P2RY13Q9BPV8 354 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 MYH11P35749 1972 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 MN1Q10571 1320 aaPredicted RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 AKAP11Q9UKA4 1901 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 RBMXL2O75526 392 aaKnown RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 RAB3BP20337 219 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 TBC1D25Q3MII6 688 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 NHSL2Q5HYW2 709 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 GPR139Q6DWJ6 353 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 GTF2IRD2BQ6EKJ0 949 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 RNF165Q6ZSG1 346 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 GTF2IRD2Q86UP8 949 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 GTF2H4Q92759 462 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 C1QTNF2Q9BXJ5 285 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 C8orf33Q9H7E9 229 aaPredicted RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 TEX51A0A1B0GUA7 166 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 EEF1E1O43324 174 aaKnown RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 HOXB9P17482 250 aaPredicted RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 RPL6Q02878 288 aaKnown RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 GXYLT1Q4G148 440 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 SIX5Q8N196 739 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 NPLOC4Q8TAT6 608 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 CD99L2Q8TCZ2 262 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 ZNF566Q969W8 418 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 RAD9AQ99638 391 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 PLCXD1Q9NUJ7 323 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 PAQR5Q9NXK6 330 aaPredicted RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 KLRF1Q9NZS2 232 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 NOP16Q9Y3C1 178 aaKnown RBP6.86□□□□□ -1.31
SOX6-201ENST00000316399 GMFGO60234 142 aa6.86□□□□□ -1.31
SOX6-201ENST00000316399 ADAM23O75077 832 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms