RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SSNA1O43805 119 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 MMP20O60882 483 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 OR7A10O76100 309 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 ACADMP11310 421 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 ELNP15502 786 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 RAB40BQ12829 278 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 TMEM115Q12893 351 aaPredicted RBP10.54□□□□□ -0.72
PTPN7-201ENST00000309017 ARHGEF6Q15052 776 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 RNF180Q86T96 592 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 OR4N4Q8N0Y3 316 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 KLHL36Q8N4N3 616 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 RASGEF1AQ8N9B8 481 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 TREX2Q9BQ50 279 aaPredicted RBP10.54□□□□□ -0.72
PTPN7-201ENST00000309017 WFDC6Q9BQY6 131 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 PRR14Q9BWN1 585 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 SAP130Q9H0E3 1048 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 SPNS1Q9H2V7 528 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 FOLH1BQ9HBA9 442 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 ZCCHC3Q9NUD5 404 aaKnown RBP10.54□□□□□ -0.72
PTPN7-201ENST00000309017 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
PTPN7-201ENST00000309017 FAM170BA6NMN3 283 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 TSPAN4O14817 238 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 CHST10O43529 356 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 TSPAN9O75954 239 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PDGFAP04085 211 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 ALPPL2P10696 532 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PAICSP22234 425 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SSTR2P30874 369 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 NDUFA9Q16795 377 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 OR4D11Q8NGI4 311 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 TMEM169Q96HH4 297 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 CASD1Q96PB1 797 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 DCLRE1CQ96SD1 692 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SECISBP2Q96T21 854 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SMG9Q9H0W8 520 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 B3GNT2Q9NY97 397 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 P2RX2Q9UBL9 471 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PHF11Q9UIL8 331 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SPATA2Q9UM82 520 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 ERAL1O75616 437 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 TOXO94900 526 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PAHP00439 452 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 NPPBP16860 134 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 TPBGQ13641 420 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 NTRK2Q16620 822 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PRSS53Q2L4Q9 553 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PXDC1Q5TGL8 231 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SLC30A6Q6NXT4 461 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 ADGRD2Q7Z7M1 963 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 KRT78Q8N1N4 520 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 DUSP18Q8NEJ0 188 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SMPDL3AQ92484 453 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 UBE2E3Q969T4 207 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SLC35G5Q96KT7 338 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 ZFP3Q96NJ6 502 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 ATF6BQ99941 703 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PLA2G12AQ9BZM1 189 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 PPP1R3EQ9H7J1 279 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 EIF3KQ9UBQ5 218 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 ASF1AQ9Y294 204 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 VWA8A3KMH1 1905 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 NUMA1Q14980 2115 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 STK25O00506 426 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 FRS3O43559 492 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 ZNF821O75541 412 aaPredicted RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SLC22A5O76082 557 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 RECKO95980 971 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SDHBP21912 280 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SLC1A3P43003 542 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 KCNJ5P48544 419 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 RPS7P62081 194 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 GPR176Q14439 515 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 TRIM71Q2Q1W2 868 aaKnown RBP10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SLC8B1Q6J4K2 584 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 FAM20CQ8IXL6 584 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 AUTS2Q8WXX7 1259 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 MED18Q9BUE0 208 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 MCOLN1Q9GZU1 580 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SPG21Q9NZD8 308 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 SRRDQ9UH36 339 aa10.53□□□□□ -0.72
PTPN7-201ENST00000309017 A0A0A6YYJ9 748 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 LOC105371267A0A1B0GV96 52 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 RFXAPO00287 272 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 SEMA7AO75326 666 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 ELFN1P0C7U0 828 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 ANXA3P12429 323 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 NUDT1P36639 197 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 IFNGR2P38484 337 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 POU6F2P78424 691 aaPredicted RBP10.52□□□□□ -0.72
PTPN7-201ENST00000309017 ZBTB37Q5TC79 503 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 LAMTOR1Q6IAA8 161 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 METAP1DQ6UB28 335 aaPredicted RBP10.52□□□□□ -0.72
PTPN7-201ENST00000309017 SPRYD4Q8WW59 207 aaPredicted RBP10.52□□□□□ -0.72
PTPN7-201ENST00000309017 RFKQ969G6 155 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 CREB3L1Q96BA8 519 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms