RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RMND5BQ96G75 393 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 C16orf58Q96GQ5 468 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 COL21A1Q96P44 957 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 YIPF4Q9BSR8 244 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 MRPS26Q9BYN8 205 aaKnown RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ANKRA2Q9H9E1 313 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 PDE7BQ9NP56 450 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 EXD2Q9NVH0 621 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 DDX18Q9NVP1 670 aaKnown RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 FAM118AQ9NWS6 357 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 PDP1Q9P0J1 537 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SEMA5BQ9P283 1151 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SUSD2Q9UGT4 822 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 PILRBQ9UKJ0 227 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 LAMA1P25391 3075 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 MN1Q10571 1320 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 DSPPQ9NZW4 1301 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 A0A087WV62 115 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 A0A0G2JPF8 293 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 MYOCOSA0A1B0GUC4 107 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 BLACEA4D250 179 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 FITM1A5D6W6 292 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 HNRNPCL2B2RXH8 293 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 HNRNPCL3B7ZW38 293 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 FAM227AF5H4B4 570 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SLC16A6O15403 523 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 CHST10O43529 356 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 DUX1O43812 170 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 LDB3O75112 727 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 NSA2O95478 260 aaKnown RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 IFNW1P05000 195 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 HNRNPCL4P0DMR1 293 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 RHCEP18577 417 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 NELFEP18615 380 aaKnown RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ALDH4A1P30038 563 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 PIGAP37287 484 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 LIMS1P48059 325 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 DAPP51397 102 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 EMP3P54852 163 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 OR1D5P58170 312 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 GPLD1P80108 840 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SRSF5Q13243 272 aaKnown RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 KCNAB2Q13303 367 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 CYP27C1Q4G0S4 372 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 TCTE1Q5JU00 501 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 EXOSC6Q5RKV6 272 aaKnown RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 NKAIN2Q5VXU1 208 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 HEPHL1Q6MZM0 1159 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ISLR2Q6UXK2 745 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 OFCC1Q8IZS5 231 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ANKRD9Q96BM1 317 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 OTUB1Q96FW1 271 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF354BQ96LW1 612 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 PIP5K1AQ99755 562 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 CLK4Q9HAZ1 481 aaKnown RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SOHLH2Q9NX45 425 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 GIN1Q9NXP7 522 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SEC14L3Q9UDX4 400 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 KCND3Q9UK17 655 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 C19orf53Q9UNZ5 99 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 LIPT1Q9Y234 373 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SH3GLB1Q9Y371 365 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 TESMINQ9Y4I5 508 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ORC6Q9Y5N6 252 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 A0A0A6YYC8 382 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-205ENST00000307859 HYKKA2RU49 373 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 DUXAA6NLW8 204 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 A8MVJ9 347 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 I3L1I5 382 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-205ENST00000307859 TNFRSF11BO00300 401 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 GDF9O60383 454 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 PLOD3O60568 738 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 JRKO75564 520 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 AGR2O95994 175 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 RNH1P13489 461 aaKnown RBP11.12□□□□□ -0.63
TRIM40-205ENST00000307859 EPHA8P29322 1005 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-205ENST00000307859 CSF2RBP32927 897 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 HMGA2P52926 109 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 MAPK10P53779 464 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 SPIBQ01892 262 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 ID2Q02363 134 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 CFHR1Q03591 330 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 PRICKLE4Q2TBC4 344 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 PLK5Q496M5 336 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 PEAR1Q5VY43 1037 aaPredicted RBP11.12□□□□□ -0.63
TRIM40-205ENST00000307859 PIK3C3Q8NEB9 887 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF555Q8NEP9 628 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 OR6C4Q8NGE1 309 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 PROX1Q92786 737 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 AHCYL2Q96HN2 611 aaKnown RBP11.12□□□□□ -0.63
TRIM40-205ENST00000307859 MUS81Q96NY9 551 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 TRNT1Q96Q11 434 aaKnown RBP11.12□□□□□ -0.63
TRIM40-205ENST00000307859 PSD2Q9BQI7 771 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 SPATA5L1Q9BVQ7 753 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 EQTNQ9NQ60 294 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 NLGN3Q9NZ94 848 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 CALML5Q9NZT1 146 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms