RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DERL2Q9GZP9 239 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 B3GAT2Q9NPZ5 323 aa12.05□□□□□ -0.48
USP38-201ENST00000307017 COL1A2P08123 1366 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 ANKRD33BA6NCL7 494 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 FAM183AA6NL82 134 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 PXNP49023 591 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 LY6G5CQ5SRR4 150 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 C18orf63Q68DL7 685 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 KCTD20Q7Z5Y7 419 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 COCHO43405 550 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 ARL6IP5O75915 188 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 PROS1P07225 676 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 GGT2P36268 569 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 MC2RQ01718 297 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 ZNF763Q0D2J5 394 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 PTP4A2Q12974 167 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 CLINT1Q14677 625 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 Q6ZPB1 254 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 TMEFF1Q8IYR6 380 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 SPRYD4Q8WW59 207 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 HSD17B8Q92506 261 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 SCGB3A2Q96PL1 93 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 PAPOLGQ9BWT3 736 aaKnown RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 VDAC3Q9Y277 283 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 LMTK2Q8IWU2 1503 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 KLF8O95600 359 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 SLC10A3P09131 477 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 NR2C1P13056 603 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 PRKXP51817 358 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 RPL19P84098 196 aaKnown RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 CEACAM7Q14002 265 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 FBXW12Q6X9E4 464 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 ZNF551Q7Z340 670 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 ZER1Q7Z7L7 766 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 ASB15Q8WXK1 588 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 C20orf24Q9BUV8 137 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 TAS2R16Q9NYV7 291 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 KDELR3O43731 214 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 CD1DP15813 335 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 IL1RNP18510 177 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 UQCRC2P22695 453 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 SHC2P98077 582 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 TRAM2Q15035 370 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 NR0B2Q15466 257 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 ZNF423Q2M1K9 1284 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.04□□□□□ -0.48
USP38-201ENST00000307017 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 GSG1LQ6UXU4 331 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 SLC22A17Q8WUG5 538 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 FEVQ99581 238 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 WASF3Q9UPY6 502 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 NFS1Q9Y697 457 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 CIB4A0PJX0 185 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 SDHDO14521 159 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 LDB3O75112 727 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 GSTM3P21266 225 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 FRKP42685 505 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 CSNK2A1P68400 391 aaPredicted RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 DNAJC5GQ8N7S2 189 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 OR2AP1Q8NGE2 309 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 KCTD13Q8WZ19 329 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 CD300AQ9UGN4 299 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 EXOSC1Q9Y3B2 195 aaKnown RBP12.04□□□□□ -0.48
USP38-201ENST00000307017 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
USP38-201ENST00000307017 TRAV27A0A087WT01 109 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 C9J4A7 227 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 HLA-DMAP28067 261 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 IDH3GP51553 393 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 RAB5BP61020 215 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 SH3BP2P78314 561 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 GK2Q14410 553 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 LIPIQ6XZB0 460 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 HPSE2Q8WWQ2 592 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 MRGPRX2Q96LB1 330 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 CAMK1GQ96NX5 476 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 CCNL2Q96S94 520 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 ZNF559Q9BR84 538 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 OR2B2Q9GZK3 357 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 TBCCD1Q9NVR7 557 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 HAPLN1P10915 354 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 CD79AP11912 226 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SCGB2A2Q13296 93 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 FBXO43Q4G163 708 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 CNIH2Q6PI25 160 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 DNM1P34Q6PK57 102 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 OR52N2Q8NGI0 321 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 HUS1BQ8NHY5 278 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SYNPRQ8TBG9 265 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 TESQ9UGI8 421 aaKnown RBP12.03□□□□□ -0.48
USP38-201ENST00000307017 SYN3O14994 580 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 SGCEO43556 437 aa12.03□□□□□ -0.48
USP38-201ENST00000307017 COQ9O75208 318 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms