RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TAF13Q15543 124 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 ODF4Q2M2E3 257 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 BCDIN3DQ7Z5W3 292 aaKnown RBP12.6□□□□□ -0.39
DDX54-201ENST00000306014 RTN4RL1Q86UN2 441 aaPredicted RBP12.6□□□□□ -0.39
DDX54-201ENST00000306014 PHC2Q8IXK0 858 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 LILRA3Q8N6C8 439 aaPredicted RBP12.6□□□□□ -0.39
DDX54-201ENST00000306014 HORMAD2Q8N7B1 307 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 PROKR2Q8NFJ6 384 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 PJA1Q8NG27 643 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 OR6C4Q8NGE1 309 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 LILRB4Q8NHJ6 448 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 MYNNQ9NPC7 610 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 FBXO8Q9NRD0 319 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 CKLFQ9UBR5 152 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 PADI2Q9Y2J8 665 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 UGT2A1Q9Y4X1 527 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 COL4A5P29400 1685 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 A0A1B0GVT2 93 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 ZNF879B4DU55 563 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 LRRN3E7EW58 273 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 TGM5O43548 720 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 LATO43561 262 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 RHOP08100 348 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 DNASE1P24855 282 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 HOXC5Q00444 222 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.39
DDX54-201ENST00000306014 GAB1Q13480 694 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 CCSMST1Q4G0I0 132 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 PODNL1Q6PEZ8 512 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 ENPP7Q6UWV6 458 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.6□□□□□ -0.39
DDX54-201ENST00000306014 RASGEF1AQ8N9B8 481 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 ZNF740Q8NDX6 193 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 MSANTD3Q96H12 275 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 OR4K3Q96R72 315 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 LRRN3Q9H3W5 708 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 SLC6A13Q9NSD5 602 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 PRELID1Q9Y255 219 aa12.6□□□□□ -0.39
DDX54-201ENST00000306014 FXYD6-FXYD2A0A087WZ82 144 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 H0YIV9 168 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 L7N2F9 121 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 EMC8O43402 210 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ADAMTS4O75173 837 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ARAFP10398 606 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 CST5P28325 142 aaPredicted RBP12.59□□□□□ -0.39
DDX54-201ENST00000306014 IMPA1P29218 277 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 NKX3-2P78367 333 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 PDGFRLQ15198 375 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 SYPL1Q16563 259 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 MLIPQ5VWP3 458 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 OR4C11Q6IEV9 310 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 LINC00299Q6ZSB3 139 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ERN2Q76MJ5 926 aaKnown RBP12.59□□□□□ -0.39
DDX54-201ENST00000306014 ZNF248Q8NDW4 579 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 NR4A3Q92570 626 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ZNF354BQ96LW1 612 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 CACNG6Q9BXT2 260 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 FXYD6Q9H0Q3 95 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 CWH43Q9H720 699 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 STON1Q9Y6Q2 735 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 TTC3P53804 2025 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 PRODHO43272 600 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ITGA10O75578 1167 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 KDM4BO94953 1096 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 JUNDP17535 347 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 LCN1P31025 176 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
DDX54-201ENST00000306014 GIPRP48546 466 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ARFIP1P53367 373 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 SNTB2Q13425 540 aaKnown RBP12.59□□□□□ -0.39
DDX54-201ENST00000306014 C4orf46Q504U0 113 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 OLFML2AQ68BL7 652 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 SLC25A25Q6KCM7 469 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 OR4N5Q8IXE1 308 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 RPLP0P6Q8NHW5 317 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ZSWIM3Q96MP5 696 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 COMMD4Q9H0A8 199 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 DPEP2Q9H4A9 486 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 AKIP1Q9NQ31 210 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 MARCH5Q9NX47 278 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ASIC5Q9NY37 505 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 LIPT1Q9Y234 373 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 LOC102723532A0A0G2JNH3 316 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 A0A1W2PRQ8 180 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 M0R233 179 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 HPGDSO60760 199 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 MASP1P48740 699 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 MAN2A2P49641 1150 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 TCEAL8Q8IYN2 117 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 NKD1Q969G9 470 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 TXNDC15Q96J42 360 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 MACROD1Q9BQ69 325 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 DPCDQ9BVM2 203 aaPredicted RBP12.59□□□□□ -0.39
DDX54-201ENST00000306014 TAS2R10Q9NYW0 307 aa12.59□□□□□ -0.39
DDX54-201ENST00000306014 MRPL15Q9P015 296 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms