RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PRR22Q8IZ63 422 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 FAM9CQ8IZT9 166 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 MREGQ8N565 214 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 OR9A2Q8NGT5 310 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 BBS4Q96RK4 519 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 SENP1Q9P0U3 644 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 POLR3HQ9Y535 204 aaPredicted RBP24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 LIPGQ9Y5X9 500 aa24.28■■□□□ 1.48
CDKN2A-201ENST00000304494 LRRC3CA6NJW4 275 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 TRIM3O75382 744 aaPredicted RBP24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 LRATO95237 230 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 CLDN14O95500 239 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 CELA3AP09093 270 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 ALDH3A1P30838 453 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 PPICP45877 212 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 NNATQ16517 81 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 ZNF630Q2M218 657 aaPredicted RBP24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 FAM71E1Q6IPT2 247 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 NOXRED1Q6NXP6 359 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 RNF165Q6ZSG1 346 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 SIMC1Q8NDZ2 872 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 TMEM109Q9BVC6 243 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 ANGPTL4Q9BY76 406 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 EXO5Q9H790 373 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 EML4Q9HC35 981 aaKnown RBP24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 COQ3Q9NZJ6 369 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 CCL27Q9Y4X3 112 aa24.27■■□□□ 1.48
CDKN2A-201ENST00000304494 TRGV5A0A0B4J1U4 118 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 NPIPB8E9PQR5 432 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 NPHS1O60500 1241 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 SPAG7O75391 227 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 SEC22BO75396 215 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 PPM1BO75688 479 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 ABCB1P08183 1280 aaPredicted RBP24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 RFPL3SP0C7P2 107 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 NEFHP12036 1026 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 PLCXD2Q0VAA5 305 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 GXYLT1Q4G148 440 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 NCCRP1Q6ZVX7 275 aaPredicted RBP24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 PACS2Q86VP3 889 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 TCP10LQ8TDR4 215 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 KAT2AQ92830 837 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 SARAFQ96BY9 339 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 RILPQ96NA2 401 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 PARD6BQ9BYG5 372 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 STMN4Q9H169 189 aaPredicted RBP24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 ACKR4Q9NPB9 350 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 C1orf109Q9NX04 203 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 TAS2R7Q9NYW3 318 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 SLC17A7Q9P2U7 560 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 HRH3Q9Y5N1 445 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 GTF3C1Q12789 2109 aa24.26■■□□□ 1.47
CDKN2A-201ENST00000304494 EML6Q6ZMW3 1958 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 NAV2Q8IVL1 2488 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 FRG2CA6NGY1 282 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 FIGNL2A6NMB9 653 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 SLITRK5O94991 958 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 CASP3P42574 277 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 PSPHP78330 225 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 EMC4Q5J8M3 183 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 KANK2Q63ZY3 851 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 NUP54Q7Z3B4 507 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 TICAM1Q8IUC6 712 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 OMA1Q96E52 524 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 RUBCNLQ9H714 662 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 METTL7AQ9H8H3 244 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 LRTM1Q9HBL6 345 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 PNPLA3Q9NST1 481 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 FIS1Q9Y3D6 152 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 CRYBG3Q68DQ2 2970 aa24.25■■□□□ 1.47
CDKN2A-201ENST00000304494 NCOA6Q14686 2063 aaPredicted RBP24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 MYO1GB0I1T2 1018 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 TO15178 435 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 PLOD3O60568 738 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 GDF1P27539 372 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 GRNP28799 593 aaKnown RBP24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 NTSP30990 170 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 MASP1P48740 699 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 KIAA0040Q15053 153 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 WLSQ5T9L3 541 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 TMEM81Q6P7N7 255 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 CA5BP1Q8WTZ4 195 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 MARVELD3Q96A59 401 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 BTBD9Q96Q07 612 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 MECRQ9BV79 373 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 TAS2R9Q9NYW1 312 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 ACAD8Q9UKU7 415 aa24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 GPR55Q9Y2T6 319 aaPredicted RBP24.24■■□□□ 1.47
CDKN2A-201ENST00000304494 CELSR2Q9HCU4 2923 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 ESPNB1AK53 854 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 FGF4P08620 206 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 SERPINB5P36952 375 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 NCBP2P52298 156 aaKnown RBP eCLIP24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 BICRALQ6AI39 1079 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 ACAD11Q709F0 780 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 LIX1Q8N485 282 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 OR5M9Q8NGP3 310 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 RND1Q92730 232 aa24.23■■□□□ 1.47
CDKN2A-201ENST00000304494 SDCCAG3Q96C92 435 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms