RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 KLK6Q92876 244 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 FOPNLQ96NB1 174 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 NRTNQ99748 197 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 OR51J1Q9H342 316 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 PIGUQ9H490 435 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 TMEM38AQ9H6F2 299 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 PEPDP12955 493 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SLC6A11P48066 632 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 OR10A3P58181 314 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 EEF1A2Q05639 463 aaKnown RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 ARL9Q6T311 187 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 KANSL1Q7Z3B3 1105 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SLC51BQ86UW2 128 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 OR51G2Q8NGK0 314 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 ZFPM2Q8WW38 1151 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 RIOK2Q9BVS4 552 aaKnown RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 RSPO3Q9BXY4 272 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 RNF32Q9H0A6 362 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 FOLH1BQ9HBA9 442 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 FZD3Q9NPG1 666 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SRRDQ9UH36 339 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 LAMA2P24043 3122 aaKnown RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 ZC3H12DA2A288 527 aaKnown RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 GLOD5A6NK44 160 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 H0YIV9 168 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 TRIM3O75382 744 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 GABRA5P31644 462 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 KCNA10Q16322 511 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 AANATQ16613 207 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 CDKN3Q16667 212 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 ESPNLQ6ZVH7 1005 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 C6orf120Q7Z4R8 191 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 KIF18BQ86Y91 864 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 DCAF4L2Q8NA75 395 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 CHST14Q8NCH0 376 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 OR2AP1Q8NGE2 309 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 OR2T35Q8NGX2 323 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 HMGB4Q8WW32 186 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 KIAA1143Q96AT1 154 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 MRPL9Q9BYD2 267 aaKnown RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SUV39H2Q9H5I1 410 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SLAMF7Q9NQ25 335 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SOD1P00441 154 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 HLA-DPB1P04440 258 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 CKMP06732 381 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 LIMS3P0CW19 117 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 LIMS4P0CW20 117 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 LMAN2Q12907 356 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 HIST2H2AA3Q6FI13 130 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SMARCD3Q6STE5 483 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 Q6ZVU0 165 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 TRMT11Q7Z4G4 463 aaKnown RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 SLC43A3Q8NBI5 491 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 BBS1Q8NFJ9 593 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 UCN3Q969E3 161 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 FCRL1Q96LA6 429 aa13.85□□□□□ -0.19
COL6A2-201ENST00000300527 MS4A7Q9GZW8 240 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 H2AFY2Q9P0M6 372 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-201ENST00000300527 A0A0B4J203 849 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 PRR23AA6NEV1 266 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 EIF4EP06730 217 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 PROS1P07225 676 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 PRKACAP17612 351 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 HOXC8P31273 242 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 PCBP3P57721 371 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SLC3A1Q07837 685 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 LYPD4Q6UWN0 246 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 COMTD1Q86VU5 262 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 FTMTQ8N4E7 242 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 DBF4BQ8NFT6 615 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 AP2M1Q96CW1 435 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 FAM46AQ96IP4 442 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 UBQLN2Q9UHD9 624 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 RASD1Q9Y272 281 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 NLRC5Q86WI3 1866 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 CPSF4LA6NMK7 179 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 MT-ND4P03905 459 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 ACADMP11310 421 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SHC1P29353 583 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SLC1A3P43003 542 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SPINT3P49223 89 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 RNF144AP50876 292 aaPredicted RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 RPS7P62081 194 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SLC36A4Q6YBV0 504 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 LIX1LQ8IVB5 337 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 CFAP206Q8IYR0 622 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SMAP2Q8WU79 429 aaPredicted RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 CREB3L1Q96BA8 519 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 TAAR2Q9P1P5 351 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 LRFN2Q9ULH4 789 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 CACNG2Q9Y698 323 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 TDRD15B5MCY1 1934 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 DSPPQ9NZW4 1301 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 TEX51A0A1B0GUA7 166 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 DUSP11O75319 330 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SLC2A10O95528 541 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms