RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 JUNBP17275 347 aaPredicted RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 SSTR2P30874 369 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 SLC6A11P48066 632 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ARPC4P59998 168 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 B4GALNT1Q00973 533 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ATXN7L3Q14CW9 347 aaPredicted RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 ANKK1Q8NFD2 765 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ZNF563Q8TA94 476 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 PDCD10Q9BUL8 212 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 SLITRK2Q9H156 845 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 PPIL3Q9H2H8 161 aaKnown RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 METTL15A6NJ78 407 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 HIDE1A8MVS5 230 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ACADLP28330 430 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 GIPRP48546 466 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ATAD3CQ5T2N8 411 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 KLHDC8AQ8IYD2 350 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 FBXO15Q8NCQ5 510 aaPredicted RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 EPYCQ99645 322 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 FUZQ9BT04 418 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ZNF717Q9BY31 904 aaPredicted RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 KCNN2Q9H2S1 579 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 WSB2Q9NYS7 404 aaPredicted RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 MARK1Q9P0L2 795 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 NCKAP1Q9Y2A7 1128 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 NTNG1Q9Y2I2 539 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 AREL1O15033 823 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 NFATC1O95644 943 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 SRPRAP08240 638 aaKnown RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 PRR35P0CG20 571 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 OMPP47874 163 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 SOX9P48436 509 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 RPS25P62851 125 aaKnown RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 IFITM3Q01628 133 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 RAB33AQ14088 237 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 GPR19Q15760 415 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 DEFB110Q30KQ9 67 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 FAM180AQ6UWF9 173 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 SLC36A4Q6YBV0 504 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ZNF783Q6ZMS7 281 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 ZNF683Q8IZ20 524 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 SNAPC3Q92966 411 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 SAMD11Q96NU1 681 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 CD180Q99467 661 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 DPCDQ9BVM2 203 aaPredicted RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 SPNS1Q9H2V7 528 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 DDX31Q9H8H2 851 aaKnown RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 RC3H2Q9HBD1 1191 aaKnown RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 NUDT15Q9NV35 164 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 NDRG4Q9ULP0 352 aaKnown RBP12.6□□□□□ -0.39
CASC4-201ENST00000299957 BACE2Q9Y5Z0 518 aa12.6□□□□□ -0.39
CASC4-201ENST00000299957 TMEM189-UBE2V1I3L0A0 370 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 FAAHO00519 579 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 GPX5O75715 221 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 KDM4BO94953 1096 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 C1orf105O95561 183 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 DDX6P26196 483 aaKnown RBP eCLIP12.59□□□□□ -0.39
CASC4-201ENST00000299957 CTBP2P56545 445 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 SELENBP1Q13228 472 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 MAB21L1Q13394 359 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 C1orf61Q13536 156 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 DSG2Q14126 1118 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 SLC25A25Q6KCM7 469 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 RASSF6Q6ZTQ3 369 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 PHC2Q8IXK0 858 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 SLC25A36Q96CQ1 311 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 MSANTD3Q96H12 275 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 ZNF514Q96K75 400 aaPredicted RBP12.59□□□□□ -0.39
CASC4-201ENST00000299957 COL11A1P12107 1806 aaPredicted RBP12.59□□□□□ -0.39
CASC4-201ENST00000299957 H3BNC9 293 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 H7C0S8 307 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 KHNYNO15037 678 aaKnown RBP12.59□□□□□ -0.39
CASC4-201ENST00000299957 FBXO45P0C2W1 286 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 CD22P20273 847 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 ADH7P40394 386 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 RHAGQ02094 409 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 AGAP7PQ5VUJ5 663 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 SLCO4C1Q6ZQN7 724 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 RANBP3LQ86VV4 465 aaPredicted RBP12.59□□□□□ -0.39
CASC4-201ENST00000299957 LNX2Q8N448 690 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 DPF3Q92784 378 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 SAP130Q9H0E3 1048 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 SLC35C2Q9NQQ7 365 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 DKK3Q9UBP4 350 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 PIKFYVEQ9Y2I7 2098 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 EDNRAP25101 427 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 UQCRC1P31930 480 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 CXCR4P61073 352 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 KCNJ10P78508 379 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 TRAM2Q15035 370 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 OR4K13Q8NH42 304 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 SLC7A13Q8TCU3 470 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 ASB15Q8WXK1 588 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 STARD5Q9NSY2 213 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 MYEF2Q9P2K5 600 aaKnown RBP12.59□□□□□ -0.39
CASC4-201ENST00000299957 MUTYHQ9UIF7 546 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 CA5BQ9Y2D0 317 aa12.59□□□□□ -0.39
CASC4-201ENST00000299957 ZC3H12DA2A288 527 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms