RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PGGT1BP53609 377 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 APOFQ13790 326 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 PTPRRQ15256 657 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 LCN8Q6JVE9 175 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TCEAL2Q9H3H9 227 aaPredicted RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF442Q9H7R0 627 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 METTL7AQ9H8H3 244 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 IL37Q9NZH6 218 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 PRICKLE3O43900 615 aaPredicted RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 PIP5K1CO60331 668 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TPT1P13693 172 aaKnown RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 PREPP48147 710 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TGM4P49221 684 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF41P51814 821 aaPredicted RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 CYCSP99999 105 aaKnown RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TLE3Q04726 772 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 MAP4K2Q12851 820 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 PAFAH1B3Q15102 231 aaKnown RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 SGCAQ16586 387 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 LRIT3Q3SXY7 679 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TECRLQ5HYJ1 363 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 PXDC1Q5TGL8 231 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 AGAP6Q5VW22 663 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 RPL13AP3Q6NVV1 102 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 DCUN1D3Q8IWE4 304 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 MS4A15Q8N5U1 240 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 IQCF1Q8N6M8 205 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 OR4E2Q8NGC2 313 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 OR1J4Q8NGS1 313 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 AGAP4Q96P64 663 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 GKN1Q9NS71 199 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TRAPPC13A5PLN9 417 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 NDUFV2P19404 249 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 ERVFC1P60507 584 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 RPS26P62854 115 aaKnown RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 ARHGAP11BQ3KRB8 267 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 UNC50Q53HI1 259 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 DPY19L2P1Q6NXN4 242 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 MOB1BQ7L9L4 216 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 PQLC3Q8N755 202 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 GATA6Q92908 595 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 THAP7Q9BT49 309 aaPredicted RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 HRH4Q9H3N8 390 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TXNL4BQ9NX01 149 aaKnown RBP14.18□□□□□ -0.14
SCN3B-201ENST00000299333 SLC7A11Q9UPY5 501 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 POLHQ9Y253 713 aa14.18□□□□□ -0.14
SCN3B-201ENST00000299333 TOR1AO14656 332 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 YY2O15391 372 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 CD1DP15813 335 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 UGT2B7P16662 529 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 M6PRP20645 277 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 GPR19Q15760 415 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 SPRED3Q2MJR0 410 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 KIAA1211LQ6NV74 962 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 PLBD1Q6P4A8 553 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 HACD2Q6Y1H2 254 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 DPY19L4Q7Z388 723 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 SLAMF9Q96A28 289 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 MRM3Q9HC36 420 aaKnown RBP14.17□□□□□ -0.14
SCN3B-201ENST00000299333 PCDHGA7Q9Y5G6 932 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 SERPINA7P05543 415 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 SNHG28P0DPA3 235 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 LAG3P18627 525 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 CDK5R2Q13319 367 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 NFATC2Q13469 925 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 ZFAND4Q86XD8 727 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 SLC5A8Q8N695 610 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 INTS6Q9UL03 887 aaKnown RBP14.17□□□□□ -0.14
SCN3B-201ENST00000299333 ATXN7L1Q9ULK2 861 aaPredicted RBP14.17□□□□□ -0.14
SCN3B-201ENST00000299333 RNF215Q9Y6U7 377 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 B4DGG1 531 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 TRAPPC6AO75865 159 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 RBM39Q14498 530 aaKnown RBP14.17□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF619Q8N2I2 560 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 OR5P2Q8WZ92 322 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 HAS2Q92819 552 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 GON7Q9BXV9 100 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 MSCO60682 206 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 CBR1P16152 277 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 KCNJ5P48544 419 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
SCN3B-201ENST00000299333 SVBPQ8N300 66 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 TEX26Q8N6G2 289 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 FBXO27Q8NI29 283 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 PCNPQ8WW12 178 aaKnown RBP14.17□□□□□ -0.14
SCN3B-201ENST00000299333 ACDQ96AP0 544 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 RANGRFQ9HD47 186 aaPredicted RBP14.17□□□□□ -0.14
SCN3B-201ENST00000299333 PLCXD1Q9NUJ7 323 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 ASB6Q9NWX5 421 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 COPS3Q9UNS2 423 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 MSX1P28360 303 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 CASRP41180 1078 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 KCNC1P48547 511 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 POU3F4P49335 361 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 AVPI1Q5T686 147 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 CARD17Q5XLA6 110 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 SLC29A1Q99808 456 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 HINT2Q9BX68 163 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 ACTL8Q9H568 366 aa14.17□□□□□ -0.14
SCN3B-201ENST00000299333 TMEM14AQ9Y6G1 99 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms