RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 CXorf56Q9H5V9 222 aa24■■□□□ 1.43
SDCCAG3-201ENST00000298537 TRBV4-1A0A0J9YWV2 114 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 A8MU76 341 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 ZBTB11O95625 1053 aaPredicted RBP23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 ACP2P11117 423 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 MGAT2Q10469 447 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 KCTD21Q4G0X4 260 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 MAML2Q8IZL2 1156 aaPredicted RBP23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 CHDHQ8NE62 594 aaPredicted RBP23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 ADAMTS15Q8TE58 950 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 AHCYL2Q96HN2 611 aaKnown RBP23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 MS4A4EQ96PG1 132 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 BCL2L10Q9HD36 194 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 FAM32AQ9Y421 112 aaKnown RBP23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 CHST2Q9Y4C5 530 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 SPACA6W5XKT8 324 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 SLC16A6O15403 523 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 SRPX2O60687 465 aaPredicted RBP23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 GADD45GO95257 159 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 ITGA2P17301 1181 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 RHCEP18577 417 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 BTG2P78543 158 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 EPS8Q12929 822 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 MICAQ29983 383 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 PRICKLE4Q2TBC4 344 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 MLIPQ5VWP3 458 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 MAT2BQ9NZL9 334 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 NTMQ9P121 344 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 MKLN1Q9UL63 735 aa23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 GPR55Q9Y2T6 319 aaPredicted RBP23.99■■□□□ 1.43
SDCCAG3-201ENST00000298537 WDFY3Q8IZQ1 3526 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 CENPVL1A0A0U1RR11 272 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 HYKKA2RU49 373 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 TRIM64A6NGJ6 449 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 SERPINB7O75635 380 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 ATP1B1P05026 303 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 ITGAMP11215 1152 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 RNF144AP50876 292 aaPredicted RBP23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 PIGFQ07326 219 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 PIN1Q13526 163 aaPredicted RBP23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 BBS10Q8TAM1 723 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 ADNPQ9H2P0 1102 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 PDE7BQ9NP56 450 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 MAU2Q9Y6X3 613 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 CLDN24A6NM45 220 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 HRKO00198 91 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 TPST2O60704 377 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 PABPC4LP0CB38 370 aaKnown RBP23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 SEC23BQ15437 767 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 RFX4Q33E94 735 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 PMS2CLQ68D20 193 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 C16orf62Q7Z3J2 963 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 OR6T1Q8NGN1 323 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 ZNF285Q96NJ3 590 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 NMNAT1Q9HAN9 279 aaPredicted RBP23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 FBXO34Q9NWN3 711 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 PLCL2Q9UPR0 1127 aa23.98■■□□□ 1.43
SDCCAG3-201ENST00000298537 LSM11P83369 360 aaKnown RBP eCLIP23.97■■□□□ 1.432e-8■□□□□ 9.7
SDCCAG3-201ENST00000298537 NLGN4XQ8N0W4 816 aa23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 SDR16C5Q8N3Y7 309 aa23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 PIK3R3Q92569 461 aa23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 TANKQ92844 425 aa23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 MMABQ96EY8 250 aaPredicted RBP23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 CAPN10Q9HC96 672 aa23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 GIN1Q9NXP7 522 aa23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 KCND3Q9UK17 655 aa23.97■■□□□ 1.43
SDCCAG3-201ENST00000298537 DUSP8Q13202 625 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 CDC73Q6P1J9 531 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 SAMD14Q8IZD0 417 aaPredicted RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 OR2I1PQ8NGU4 316 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 GTPBP3Q969Y2 492 aaKnown RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 ALPK1Q96QP1 1244 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 NPLQ9BXD5 320 aaPredicted RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 C19orf53Q9UNZ5 99 aaPredicted RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 A8MVJ9 347 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 NUDT21O43809 227 aaKnown RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 HYAL3O43820 417 aaPredicted RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 RXRGP48443 463 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 IL5RAQ01344 420 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 CSTF1Q05048 431 aaKnown RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 NPRL3Q12980 569 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 FAM214AQ32MH5 1076 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 KRT73Q86Y46 540 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 PHF10Q8WUB8 498 aaKnown RBP23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 ZDHHC12Q96GR4 267 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 CLDN16Q9Y5I7 305 aa23.96■■□□□ 1.43
SDCCAG3-201ENST00000298537 A0A0G2JPF8 293 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 HNRNPCL2B2RXH8 293 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 HNRNPCL3B7ZW38 293 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 PCDHGA12O60330 932 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 NTN1O95631 604 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 HNRNPCL4P0DMR1 293 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 ETS2P15036 469 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 HOXC5Q00444 222 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 SLC13A2Q13183 592 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 NPTX1Q15818 432 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 ZC3H14Q6PJT7 736 aaKnown RBP23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 RBM44Q6ZP01 1051 aaKnown RBP23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 NUDT22Q9BRQ3 303 aa23.95■■□□□ 1.43
SDCCAG3-201ENST00000298537 PTGFRNQ9P2B2 879 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms