RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 TMEM38AQ9H6F2 299 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 HCFC1R1Q9NWW0 138 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 ZNF224Q9NZL3 707 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 NCKAP1Q9Y2A7 1128 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 F5P12259 2224 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 LOC105369274A0A096LPK9 316 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 HNRNPCL2B2RXH8 293 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 FFAR1O14842 300 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 LATO43561 262 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 AKAP8O43823 692 aaKnown RBP11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 CDKN3Q16667 212 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 CCDC149Q6ZUS6 474 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 OR4N4Q8N0Y3 316 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 KLHL36Q8N4N3 616 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 SIMC1Q8NDZ2 872 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 CXorf40BQ96DE9 158 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 FERD3LQ96RJ6 166 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 CHIAQ9BZP6 476 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 SAP130Q9H0E3 1048 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 NEUROD4Q9HD90 331 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 CUEDC1Q9NWM3 386 aaPredicted RBP11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 NPAP1Q9NZP6 1156 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 TNFRSF10DQ9UBN6 386 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 IL36AQ9UHA7 158 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 BACE2Q9Y5Z0 518 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 V9GYH0 126 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 SPEGQ15772 3267 aa11.9□□□□□ -0.5
TMEM200A-201ENST00000296978 HEPACAM2A8MVW5 462 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 ZNF821O75541 412 aaPredicted RBP11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 PRG2P13727 222 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 ETV6P41212 452 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 RPS5P46782 204 aaKnown RBP11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 FAM205BPQ63HN1 556 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 BICRALQ6AI39 1079 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 FAM71E1Q6IPT2 247 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 NUDT13Q86X67 352 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 OR6T1Q8NGN1 323 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 PIGXQ8TBF5 258 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 ZNF354BQ96LW1 612 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 ZNF582Q96NG8 517 aaPredicted RBP11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 SIGLEC11Q96RL6 698 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 KATNB1Q9BVA0 655 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 MYNNQ9NPC7 610 aa11.9□□□□□ -0.51
TMEM200A-201ENST00000296978 IGHA2P01877 340 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 CLTBP09497 229 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 GNSP15586 552 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 PSMA3P25788 255 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 TLE2Q04725 743 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 ADAM15Q13444 863 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 UNC5DQ6UXZ4 953 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 RAB42Q8N4Z0 105 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 BEST4Q8NFU0 473 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 SLC46A2Q9BY10 475 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 NXF2Q9GZY0 626 aaKnown RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 TEX10Q9NXF1 929 aaPredicted RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 SCN10AQ9Y5Y9 1956 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 K7ESM1 405 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 RGS13O14921 159 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 PGRMC2O15173 223 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 ERI3O43414 337 aaKnown RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 CXCL14O95715 111 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 TIMP2P16035 220 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 BMP7P18075 431 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 GABRB1P18505 474 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 ALAS2P22557 587 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 FLYWCH1Q4VC44 716 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 ANKRD54Q6NXT1 300 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 ZER1Q7Z7L7 766 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 OR56A3Q8NH54 315 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 RFKQ969G6 155 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 FAIM2Q9BWQ8 316 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 ELAC1Q9H777 363 aaKnown RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 NDUFB11Q9NX14 153 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 EXO1Q9UQ84 846 aaKnown RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 RANBP2P49792 3224 aaKnown RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 PCCBP05166 539 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 SLC35G4P0C7Q5 338 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 HOXB9P17482 250 aaPredicted RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 RPL6Q02878 288 aaKnown RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 MPEG1Q2M385 716 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 FAM46CQ5VWP2 391 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 RNF165Q6ZSG1 346 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 ADAMTS15Q8TE58 950 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 AKAP1Q92667 903 aaKnown RBP eCLIP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 NUDT15Q9NV35 164 aa11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 EIF3KQ9UBQ5 218 aaKnown RBP11.89□□□□□ -0.51
TMEM200A-201ENST00000296978 MN1Q10571 1320 aaPredicted RBP11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 DAPL1A0PJW8 107 aa11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 PPM1DO15297 605 aa11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 CHST10O43529 356 aa11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 REM1O75628 298 aa11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 SAGP10523 405 aaPredicted RBP11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 ACVR1BP36896 505 aa11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 WASP42768 502 aa11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 CLCNKAP51800 687 aa11.88□□□□□ -0.51
TMEM200A-201ENST00000296978 MVDP53602 400 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms