RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 KLHL29Q96CT2 875 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 OMA1Q96E52 524 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 RMND5BQ96G75 393 aaPredicted RBP17.9■□□□□ 0.46
CXCL3-201ENST00000296026 LCORQ96JN0 433 aaPredicted RBP17.9■□□□□ 0.46
CXCL3-201ENST00000296026 NODALQ96S42 347 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 CXXC4Q9H2H0 198 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 MRPL46Q9H2W6 279 aaKnown RBP17.9■□□□□ 0.46
CXCL3-201ENST00000296026 BRF2Q9HAW0 419 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 ZNF639Q9UID6 485 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 PSME2Q9UL46 239 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 SNX6Q9UNH7 406 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 C2orf72A6NCS6 295 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 MBD3L4A6NDZ8 208 aaPredicted RBP17.89■□□□□ 0.45
CXCL3-201ENST00000296026 MBD3L3A6NE82 208 aaPredicted RBP17.89■□□□□ 0.45
CXCL3-201ENST00000296026 MBD3L5A6NJ08 208 aaPredicted RBP17.89■□□□□ 0.45
CXCL3-201ENST00000296026 A8MT66 165 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 TRIM49D1C9J1S8 452 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 POC1B-GALNT4F8VUJ3 575 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 ICOSLGO75144 302 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 CD99P14209 185 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 SOX18P35713 384 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 ALDH9A1P49189 494 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 AGFG1P52594 562 aaKnown RBP17.89■□□□□ 0.45
CXCL3-201ENST00000296026 DUSP2Q05923 314 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 PLCXD2Q0VAA5 305 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 SLC30A6Q6NXT4 461 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 FAM180BQ6P0A1 224 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 TMEM81Q6P7N7 255 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 GOT1L1Q8NHS2 421 aaPredicted RBP17.89■□□□□ 0.45
CXCL3-201ENST00000296026 MBD3L2Q8NHZ7 208 aaPredicted RBP17.89■□□□□ 0.45
CXCL3-201ENST00000296026 CTHRC1Q96CG8 243 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 HBEGFQ99075 208 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 OSBPL11Q9BXB4 747 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 TSPYL1Q9H0U9 437 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 GALNT9Q9HCQ5 603 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 NMRK1Q9NWW6 199 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 FETUBQ9UGM5 382 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 CBLCQ9ULV8 474 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 PLLPQ9Y342 182 aa17.89■□□□□ 0.45
CXCL3-201ENST00000296026 SNPHO15079 494 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 ACOX3O15254 700 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 DIAPH2O60879 1101 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 OR4F21O95013 312 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CBX7O95931 251 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 ACTL6AO96019 429 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 SBK3P0C264 359 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 TACR1P25103 407 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CTSSP25774 331 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CNTFP26441 200 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 PTGDSP41222 190 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 RCAN2Q14206 197 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 LTB4RQ15722 352 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CEBPEQ15744 281 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 TRMT12Q53H54 448 aaKnown RBP17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CDC20BQ86Y33 519 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 TMEM151AQ8N4L1 468 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 C1orf52Q8N6N3 182 aaKnown RBP17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CHDHQ8NE62 594 aaPredicted RBP17.88■□□□□ 0.45
CXCL3-201ENST00000296026 OR52R1Q8NGF1 315 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 DCAKDQ8WVC6 231 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CNRIP1Q96F85 164 aaPredicted RBP17.88■□□□□ 0.45
CXCL3-201ENST00000296026 TMUB1Q9BVT8 246 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 FAIM2Q9BWQ8 316 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 C1QTNF3Q9BXJ4 246 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 CALHM2Q9HA72 323 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 EHD3Q9NZN3 535 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 KLRF1Q9NZS2 232 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 TRPS1Q9UHF7 1281 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 DMGDHQ9UI17 866 aaKnown RBP17.88■□□□□ 0.45
CXCL3-201ENST00000296026 ZNF180Q9UJW8 692 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 ZNF225Q9UK10 706 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 MAPRE3Q9UPY8 281 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 ZNF780BQ9Y6R6 833 aa17.88■□□□□ 0.45
CXCL3-201ENST00000296026 TUBAL3A6NHL2 446 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 UGT2B11O75310 529 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 URI1O94763 535 aaPredicted RBP17.87■□□□□ 0.45
CXCL3-201ENST00000296026 RHOXF2BP0C7M4 288 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 DRD5P21918 477 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 OPRM1P35372 400 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 GCKP35557 465 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 PPICP45877 212 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 DCAF7P61962 342 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 TRA2BP62995 288 aaKnown RBP17.87■□□□□ 0.45
CXCL3-201ENST00000296026 MRPS35P82673 323 aaKnown RBP17.87■□□□□ 0.45
CXCL3-201ENST00000296026 SNTA1Q13424 505 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 DAZAP2Q15038 168 aaPredicted RBP17.87■□□□□ 0.45
CXCL3-201ENST00000296026 TEX35Q5T0J7 233 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 KIF18BQ86Y91 864 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 TGIF2LYQ8IUE0 185 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 UHMK1Q8TAS1 419 aaKnown RBP17.87■□□□□ 0.45
CXCL3-201ENST00000296026 ZPLD1Q8TCW7 415 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 IFT81Q8WYA0 676 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 ZNF681Q96N22 645 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 FMO2Q99518 471 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 SERHLQ9NQF3 203 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 VPS29Q9UBQ0 182 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 PRODH2Q9UF12 536 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 EDARQ9UNE0 448 aa17.87■□□□□ 0.45
CXCL3-201ENST00000296026 EXO1Q9UQ84 846 aaKnown RBP17.87■□□□□ 0.45
CXCL3-201ENST00000296026 PLEKHA6Q9Y2H5 1048 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms