RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 FGF19O95750 216 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 CXCL10P02778 98 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 SLC2A2P11168 524 aaPredicted RBP15.02■□□□□ -0
SMAD6-201ENST00000288840 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
SMAD6-201ENST00000288840 PCSK2P16519 638 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 CHRNEQ04844 493 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 GPM6BQ13491 265 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 WSCD2Q2TBF2 565 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 TCTN3Q6NUS6 607 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 PDZD3Q86UT5 571 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 ZNF433Q8N7K0 673 aaPredicted RBP15.02■□□□□ -0
SMAD6-201ENST00000288840 INSM2Q96T92 566 aaPredicted RBP15.02■□□□□ -0
SMAD6-201ENST00000288840 SPATA9Q9BWV2 254 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 SLAMF7Q9NQ25 335 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 SEC14L4Q9UDX3 406 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 NUFIP1Q9UHK0 495 aaKnown RBP15.02■□□□□ -0
SMAD6-201ENST00000288840 TIMP1P01033 207 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 TYRP1P17643 537 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 CBLP22681 906 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 GIPRP48546 466 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 COX10Q12887 443 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 ZNF181Q2M3W8 571 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 OOSP2Q86WS3 158 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 ACOT4Q8N9L9 421 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 BBS10Q8TAM1 723 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 FGF13Q92913 245 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 NEDD4LQ96PU5 975 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 GLIPR2Q9H4G4 154 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 RPS6KB2Q9UBS0 482 aa15.02■□□□□ -0
SMAD6-201ENST00000288840 A0A1W2PQ09 198 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 IFNA16P05015 189 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 SLC35G6P0C7Q6 338 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 HPGDP15428 266 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 IL1RNP18510 177 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 ELAVL4P26378 380 aaKnown RBP15.02□□□□□ -0.01
SMAD6-201ENST00000288840 XCR1P46094 333 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 LARS2Q15031 903 aaKnown RBP15.02□□□□□ -0.01
SMAD6-201ENST00000288840 SF3B4Q15427 424 aaKnown RBP eCLIP15.02□□□□□ -0.012e-7■■□□□ 13.4
SMAD6-201ENST00000288840 FXNQ16595 210 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 KLHL22Q53GT1 634 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 PEX5LQ8IYB4 626 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 NLGN4YQ8NFZ3 816 aaPredicted RBP15.02□□□□□ -0.01
SMAD6-201ENST00000288840 SETD7Q8WTS6 366 aaKnown RBP15.02□□□□□ -0.01
SMAD6-201ENST00000288840 TRIM43Q96BQ3 446 aaPredicted RBP15.02□□□□□ -0.01
SMAD6-201ENST00000288840 C11orf24Q96F05 449 aaPredicted RBP15.02□□□□□ -0.01
SMAD6-201ENST00000288840 DPEP2Q9H4A9 486 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 ZNF222Q9UK12 451 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 CMAHPQ9Y471 501 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 ATG4BQ9Y4P1 393 aa15.02□□□□□ -0.01
SMAD6-201ENST00000288840 ZSWIM8A7E2V4 1837 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 HTR3EA5X5Y0 456 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 VEGFDO43915 354 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 CPNE3O75131 537 aaKnown RBP15.01□□□□□ -0.01
SMAD6-201ENST00000288840 RAB36O95755 333 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 IFI30P13284 250 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ITGB7P26010 798 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 DDX6P26196 483 aaKnown RBP eCLIP15.01□□□□□ -0.012e-6■■■■■ 34.3
SMAD6-201ENST00000288840 TAS2R38P59533 333 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ZNF544Q6NX49 715 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 PNCKQ6P2M8 343 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 COX18Q8N8Q8 333 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 SCAIQ8N9R8 606 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 MINDY2Q8NBR6 621 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 CHFRQ96EP1 664 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 RAD9AQ99638 391 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 PCBD2Q9H0N5 130 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ZFR2Q9UPR6 939 aaKnown RBP15.01□□□□□ -0.01
SMAD6-201ENST00000288840 BRWD1Q9NSI6 2320 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 C1orf226A1L170 272 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 AGAP14A8MT82 685 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 OR5F1O95221 314 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 MTNR1AP48039 350 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 MPEG1Q2M385 716 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 FAM78AQ5JUQ0 283 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ACSM5Q6NUN0 579 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 MTFR2Q6P444 385 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 SYCE2Q6PIF2 218 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 NRSN1Q8IZ57 195 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ANKRD53Q8N9V6 530 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 FAM98AQ8NCA5 519 aaKnown RBP15.01□□□□□ -0.01
SMAD6-201ENST00000288840 RERGQ96A58 199 aaPredicted RBP15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ZNF354BQ96LW1 612 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 CAMK1GQ96NX5 476 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 SP140LQ9H930 580 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 PAQR5Q9NXK6 330 aaPredicted RBP15.01□□□□□ -0.01
SMAD6-201ENST00000288840 TNFRSF10DQ9UBN6 386 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 SNX7Q9UNH6 387 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 VWA8A3KMH1 1905 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 DAPL1A0PJW8 107 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 J3QLW9 94 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ZNF19P17023 458 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 AHRP35869 848 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ACVR1BP36896 505 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 PUM1Q14671 1186 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMAD6-201ENST00000288840 TUBA3EQ6PEY2 450 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 ZNF547Q8IVP9 402 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 NEIL3Q8TAT5 605 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 VMP1Q96GC9 406 aa15.01□□□□□ -0.01
SMAD6-201ENST00000288840 TP63Q9H3D4 680 aaPredicted RBP15.01□□□□□ -0.01
SMAD6-201ENST00000288840 MED20Q9H944 212 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms