RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PEBP4Q96S96 227 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CACNG6Q9BXT2 260 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ARMC1Q9NVT9 282 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 GHRLQ9UBU3 117 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TNFSF12O43508 249 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ELNP15502 786 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 FBLP22087 321 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ELOAQ14241 798 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 UBE2NLQ5JXB2 153 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NUP43Q8NFH3 380 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NANOS1Q8WY41 292 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 DAZLQ92904 295 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 MS4A4EQ96PG1 132 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TSPAN10Q9H1Z9 355 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CICQ96RK0 1608 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SEC14L2O76054 403 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PITPNBP48739 271 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 AGTR2P50052 363 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RIN1Q13671 783 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ELOCQ15369 112 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 HMGN3Q15651 99 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 LRIT3Q3SXY7 679 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RNF111Q6ZNA4 994 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 GTPBP8Q8N3Z3 284 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 DEDD2Q8WXF8 326 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 KIAA1143Q96AT1 154 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 LRR1Q96L50 414 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SLC2A13Q96QE2 648 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 LRFN1Q9P244 771 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 A6NIZ1 184 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 EFCAB7A8K855 629 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ACOT7O00154 380 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TP53P04637 393 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 MMP2P08253 660 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SLC35E2BP0CK96 405 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 GABRA3P34903 492 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NRLP54845 237 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RAP1BP61224 184 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RAP1AP62834 184 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NKX6-1P78426 367 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ARHGAP1Q07960 439 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 B3GNT3Q9Y2A9 372 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CD8B2A6NJW9 211 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 F5H5P2 479 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SNNO75324 88 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CD8BP10966 210 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RPL35P42766 123 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CLDN8P56748 225 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RNASE10Q5GAN6 216 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TRIM46Q7Z4K8 759 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 UMODL1-AS1Q8N2C9 162 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PRRT1Q99946 306 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PITHD1Q9GZP4 211 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 C2orf42Q9NWW7 574 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RHCGQ9UBD6 479 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 C5P01031 1676 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TRIM64BA6NI03 449 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 HHLA1C9JL84 531 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 UPK1BO75841 260 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 MTNR1AP48039 350 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TAS2R20P59543 309 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PRPS1P60891 318 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NKX3-2P78367 333 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NIPAL4Q0D2K0 466 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CAMK2DQ13557 499 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 AWAT2Q6E213 333 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TM9SF4Q92544 642 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 KLK6Q92876 244 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SYT3Q9BQG1 590 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 APMAPQ9HDC9 416 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SMOXQ9NWM0 555 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CACNG2Q9Y698 323 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 MDC1Q14676 2089 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 RDH16O75452 317 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PRKCGP05129 697 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CFIP05156 583 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PFKMP08237 780 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TBPL1P62380 186 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 GPR17Q13304 367 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 LSAMPQ13449 338 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 KEAP1Q14145 624 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 ENPP6Q6UWR7 440 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CMTM1Q8IZ96 169 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 OR8K5Q8NH50 307 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 MYADMQ96S97 322 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 OR8D2Q9GZM6 311 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PTNP21246 168 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 KCNJ5P48544 419 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 CD97P48960 835 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 TAS2R38P59533 333 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NPY5RQ15761 445 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SLC14A2Q15849 920 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 SLC35F1Q5T1Q4 408 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 NIPAL3Q6P499 406 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 WDR77Q9BQA1 342 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 OR51E2Q9H255 320 aa7.61□□□□□ -1.19
LIMD1-201ENST00000273317 PPIL3Q9H2H8 161 aaKnown RBP7.61□□□□□ -1.19
LIMD1-201ENST00000273317 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms