RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GFERP55789 205 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 PIN1Q13526 163 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 INAQ16352 499 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 SYT16Q17RD7 645 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 FAM220AQ7Z4H9 259 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 FEVQ99581 238 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 OSBPL10Q9BXB5 764 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 PCED1AQ9H1Q7 454 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 CHRDQ9H2X0 955 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 SNX11Q9Y5W9 270 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 PRAMEF10O60809 474 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 APOA1P02647 267 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 CSF2P04141 144 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 NR4A1P22736 598 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 CASRP41180 1078 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC48A1Q6P1K1 146 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 KCTD8Q6ZWB6 473 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 LINC01555Q8NAE3 123 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 RCBTB1Q8NDN9 531 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 PJA1Q8NG27 643 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 OR7D2Q96RA2 312 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 PADI2Q9Y2J8 665 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 COMMD3-BMI1R4GMX3 469 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 EFCAB7A8K855 629 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 TLX2O43763 284 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 CBLP22681 906 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 TMED10P49755 219 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 DLEU7Q6UYE1 221 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 PRR22Q8IZ63 422 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 DNAJA3Q96EY1 480 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 AMDHD1Q96NU7 426 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC29A1Q99808 456 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC6A20Q9NP91 592 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 SDHAF3Q9NRP4 125 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 SERINC1Q9NRX5 453 aa13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 RSL24D1Q9UHA3 163 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-201ENST00000265810 C2orf92A0A1B0GVN3 265 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 PPM1DO15297 605 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 RCBTB2O95199 551 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 HMGN1P05114 100 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 CELA2BP08218 269 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 SMSP52788 366 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 FAM69BQ5VUD6 431 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 AP1ARQ63HQ0 302 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 NUP54Q7Z3B4 507 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 ANKRD53Q8N9V6 530 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 OR5L2Q8NGL0 311 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 PIK3R3Q92569 461 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 NR4A3Q92570 626 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC39A1Q9NY26 324 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 RP1L1Q8IWN7 2480 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 BLOC1S5-TXNDC5H3BN57 136 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 TSFMP43897 325 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 TXNL4AP83876 142 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 SRSF5Q13243 272 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 SHQ1Q6PI26 577 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 B3GNT6Q6ZMB0 384 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 ZNF595Q8IYB9 648 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 HS3ST5Q8IZT8 346 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 CREB3L4Q8TEY5 395 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 C14orf105Q9NVL8 296 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 ALKBH4Q9NXW9 302 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 PISDQ9UG56 409 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 A0A1W2PR48 441 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 IRGMA1A4Y4 181 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 DBTP11182 482 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 CAPZBP47756 277 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 COX20Q5RI15 118 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 TP53INP1Q96A56 240 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 IKZF2Q9UKS7 526 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 PIAS2O75928 621 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 LIM2P55344 173 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 DGUOKQ16854 277 aa13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 PTRH2Q9Y3E5 179 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-201ENST00000265810 FAAHO00519 579 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 KCNK5O95279 499 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 SOD1P00441 154 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 HOXC4P09017 264 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 GSTT1P30711 240 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 DCTP40126 519 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 BTBD16Q32M84 506 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC35F1Q5T1Q4 408 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 OR6K6Q8NGW6 343 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 NRG4Q8WWG1 115 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 ZHX1-C8orf76Q96EF9 292 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 CTRCQ99895 268 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 DAPP1Q9UN19 280 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 MIA3Q5JRA6 1907 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 LINC00854A0A1B0GVQ3 168 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 BCKDHBP21953 392 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 MANEAQ5SRI9 462 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 TCEANCQ8N8B7 351 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 OR10H5Q8NGA6 315 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 OR51A7Q8NH64 312 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 SFXN5Q8TD22 340 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 C1GALT1C1Q96EU7 318 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 RNFT2Q96EX2 444 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 ZNF300Q96RE9 604 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 EPYCQ99645 322 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms