RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CLEC3AO75596 197 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 GADD45AP24522 165 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ALG10BQ5I7T1 473 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 KCTD18Q6PI47 426 aaPredicted RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 TMPRSS9Q7Z410 1059 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ZNF440Q8IYI8 595 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ACBD7Q8N6N7 88 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 OR9A2Q8NGT5 310 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 OR8K3Q8NH51 312 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 SUN5Q8TC36 379 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 FAM46AQ96IP4 442 aaKnown RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 KATNBL1Q9H079 304 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 DPAGT1Q9H3H5 408 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 NANSQ9NR45 359 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 OR6C2Q9NZP2 312 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 M0R3H8 397 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 SLITRK5O94991 958 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 GSTM2P28161 218 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 PIN1Q13526 163 aaPredicted RBP13.27□□□□□ -0.28
CDH3-201ENST00000264012 GAS6Q14393 721 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 LKAAEAR1Q8TD35 194 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 CLCC1Q96S66 551 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 ZNF559Q9BR84 538 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 SRA1Q9HD15 236 aaKnown RBP13.27□□□□□ -0.28
CDH3-201ENST00000264012 PPP4R1LQ9P1A2 415 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 PCDHGB6Q9Y5F9 930 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 PCDHGA10Q9Y5H3 936 aa13.27□□□□□ -0.28
CDH3-201ENST00000264012 TRAPPC13A5PLN9 417 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 SOBPA7XYQ1 873 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 CSTBP04080 98 aaKnown RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 PXNP49023 591 aaPredicted RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 RNF175Q8N4F7 328 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 OR9Q2Q8NGE9 314 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 NRG4Q8WWG1 115 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 S100A16Q96FQ6 103 aaKnown RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 ZNF300Q96RE9 604 aaPredicted RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 SLC6A16Q9GZN6 736 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 PITHD1Q9GZP4 211 aaPredicted RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 CLMPQ9H6B4 373 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 ENAMQ9NRM1 1142 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 ITGA5P08648 1049 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 PGAM2P15259 253 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 DNASE1L3Q13609 305 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 CDRT4Q8N9R6 151 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 CREB3L4Q8TEY5 395 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 CCDC107Q8WV48 283 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 THAP4Q8WY91 577 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 GAL3ST3Q96A11 431 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 TESCQ96BS2 214 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 TIMM29Q9BSF4 260 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 NMNAT1Q9HAN9 279 aaPredicted RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 PHIPQ8WWQ0 1821 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 HMGN2P05204 90 aaKnown RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 HCKP08631 526 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 OSMP13725 252 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 S1PR1P21453 382 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 PDX1P52945 283 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 SEC23BQ15437 767 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 FAM189A2Q15884 450 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 MICAQ29983 383 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 ARHGAP11AQ6P4F7 1023 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 TMEM17Q86X19 198 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 CCDC36Q8IYA8 594 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 GTF2H4Q92759 462 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 TOE1Q96GM8 510 aaKnown RBP13.27□□□□□ -0.29
CDH3-201ENST00000264012 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 ZNF639Q9UID6 485 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 PCDHGB2Q9Y5G2 931 aa13.27□□□□□ -0.29
CDH3-201ENST00000264012 CTBSQ01459 385 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 ZNF45Q02386 682 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 THOC7Q6I9Y2 204 aaKnown RBP13.26□□□□□ -0.29
CDH3-201ENST00000264012 HS3ST5Q8IZT8 346 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 SAMD12Q8N8I0 201 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 CEP76Q8TAP6 659 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 MZB1Q8WU39 189 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 SLC41A3Q96GZ6 507 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 FUNDC2Q9BWH2 189 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 AGPAT4Q9NRZ5 378 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 ASB6Q9NWX5 421 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 HCN2Q9UL51 889 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 A0A1W2PPL8 197 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 WASHC1A8K0Z3 465 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 CDC40O60508 579 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDH3-201ENST00000264012 PRAMEF2O60811 474 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 HMGA1P17096 107 aaKnown RBP13.26□□□□□ -0.29
CDH3-201ENST00000264012 PSMB5P28074 263 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 WASH2PQ6VEQ5 465 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 NCCRP1Q6ZVX7 275 aaPredicted RBP13.26□□□□□ -0.29
CDH3-201ENST00000264012 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 OR5L2Q8NGL0 311 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 GATAD2BQ8WXI9 593 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 KLF15Q9UIH9 416 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 MYO7AQ13402 2215 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 A0A0J9YY10 115 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 TCRBV3S1A0A5B6 114 aa13.26□□□□□ -0.29
CDH3-201ENST00000264012 PRSS38A1L453 326 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms