RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 FKBP10Q96AY3 582 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 PELI2Q9HAT8 420 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 B3GAT2Q9NPZ5 323 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ABCD2Q9UBJ2 740 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ENPP5Q9UJA9 477 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 TRAPPC13A5PLN9 417 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 WASHC1A8K0Z3 465 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 WASH3PC4AMC7 463 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 MUSKO15146 869 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 NUAK1O60285 661 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 CFIP05156 583 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 H2AFB2P0C5Z0 115 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 MAGEA12P43365 314 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 GDI2P50395 445 aaKnown RBP10.23□□□□□ -0.77
CD44-201ENST00000263398 FXYD6P3P58550 94 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 S100A10P60903 97 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 MPP7Q5T2T1 576 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 WASH2PQ6VEQ5 465 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ZNF534Q76KX8 674 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 KCTD9Q7L273 389 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ZNF440Q8IYI8 595 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 TRIM43Q96BQ3 446 aaPredicted RBP10.23□□□□□ -0.77
CD44-201ENST00000263398 TESCQ96BS2 214 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ZNF471Q9BX82 626 aaPredicted RBP10.23□□□□□ -0.77
CD44-201ENST00000263398 SRA1Q9HD15 236 aaKnown RBP10.23□□□□□ -0.77
CD44-201ENST00000263398 NANSQ9NR45 359 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 COPZ2Q9P299 210 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 GJD2Q9UKL4 321 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 NAV1Q8NEY1 1877 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 SMAD6O43541 496 aaKnown RBP10.23□□□□□ -0.77
CD44-201ENST00000263398 TGM5O43548 720 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 RP2O75695 350 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 CDC123O75794 336 aaPredicted RBP10.23□□□□□ -0.77
CD44-201ENST00000263398 APBB3O95704 486 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 PRLP01236 227 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ADRB3P13945 408 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 SIM1P81133 766 aaPredicted RBP10.23□□□□□ -0.77
CD44-201ENST00000263398 ZXDBP98169 803 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ELOCQ15369 112 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 FAM76BQ5HYJ3 339 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 FIGNL1Q6PIW4 674 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 NRMQ8IXM6 262 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 OR5J2Q8NH18 312 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ZDHHC12Q96GR4 267 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 CCDC120Q96HB5 630 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 UBXN10Q96LJ8 280 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 AIFM2Q9BRQ8 373 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ACPTQ9BZG2 426 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 ARHGAP39Q9C0H5 1083 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 NLKQ9UBE8 527 aa10.23□□□□□ -0.77
CD44-201ENST00000263398 KLF8O95600 359 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 PLGP00747 810 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 GNAO1P09471 354 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 ADORA3P0DMS8 318 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 WNT4P56705 351 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 ATXN7L3Q14CW9 347 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 CST6Q15828 149 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 DGLUCYQ7Z3D6 616 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 TIGD4Q8IY51 512 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 OR8S1Q8NH09 359 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 PXYLP1Q8TE99 480 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 DAZLQ92904 295 aaKnown RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 PDLIM5Q96HC4 596 aaKnown RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 A0A1W2PQL4 384 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 SLC10A3P09131 477 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 PRKCAP17252 672 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 GGT2P36268 569 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 CPOXP36551 454 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 ADH7P40394 386 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 DPP6P42658 865 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 DHPSP49366 369 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 PIN1Q13526 163 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 NNATQ16517 81 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 MORN1Q5T089 497 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 TMEM164Q5U3C3 297 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 PLAG1Q6DJT9 500 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 C17orf99Q6UX52 265 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 CLEC14AQ86T13 490 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 ZNF584Q8IVC4 421 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 SHDQ96IW2 340 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 CNN2Q99439 309 aaKnown RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 ACTRT3Q9BYD9 372 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 ZNF700Q9H0M5 742 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 GPN2Q9H9Y4 310 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 IL21RQ9HBE5 538 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 MCCC2Q9HCC0 563 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 ASB6Q9NWX5 421 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 PLCL2Q9UPR0 1127 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 GKN3PP0CG01 181 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 CLUP10909 449 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 RAB3BP20337 219 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 C5AR1P21730 350 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 MAN2A2P49641 1150 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 ZNF791Q3KP31 576 aaPredicted RBP10.22□□□□□ -0.77
CD44-201ENST00000263398 TMEM225Q6GV28 225 aa10.22□□□□□ -0.77
CD44-201ENST00000263398 PLBD1Q6P4A8 553 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms