RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 SPATA6LQ8N4H0 392 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 L3MBTL4Q8NA19 623 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 TEX19Q8NA77 164 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 ZNF527Q8NB42 609 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 OR5M9Q8NGP3 310 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 OR1S1Q8NH92 325 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 OR14A16Q8NHC5 309 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 MOSPD2Q8NHP6 518 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 DNAJB14Q8TBM8 379 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 APH1BQ8WW43 257 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 GGHQ92820 318 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 DNASE1L2Q92874 299 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
CCNA1-201ENST00000255465 MGLLQ99685 303 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 ZNF559Q9BR84 538 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 C1QTNF6Q9BXI9 259 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 GABARAPL3Q9BY60 117 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 DUSP16Q9BY84 665 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 ACTR6Q9GZN1 396 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 EGLN1Q9GZT9 426 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 RNF167Q9H6Y7 350 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 GHRLQ9UBU3 117 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 FBXO10Q9UK96 956 aa11.21□□□□□ -0.61
CCNA1-201ENST00000255465 TRAV19A0A0A6YYK7 116 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 A0A1W2PQL4 384 aaPredicted RBP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 TMEM210A6NLX4 147 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 L7N2F9 121 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 TNFRSF10BO14763 440 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 SCAMP3O14828 347 aaKnown RBP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 UGDHO60701 494 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 SCN2BO60939 215 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 METTL18O95568 372 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 CALCAP01258 141 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 SERPINA5P05154 406 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 SCG5P05408 212 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 CRYBA1P05813 215 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 PPP3CBP16298 524 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 TMEM11P17152 192 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 FPR1P21462 350 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 PSMA1P25786 263 aaKnown RBP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 CCR7P32248 378 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 RPL6Q02878 288 aaKnown RBP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 ACER2Q5QJU3 275 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 CPZQ66K79 652 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 FAM122BQ7Z309 247 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 PQLC3Q8N755 202 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 OR9Q1Q8NGQ5 310 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 TFAP2BQ92481 460 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 RHBDF1Q96CC6 855 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 LRFN5Q96NI6 719 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 GPR78Q96P69 363 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 ENKD1Q9H0I2 346 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 OSBPL2Q9H1P3 480 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 DUSP15Q9H1R2 295 aaPredicted RBP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 KCNK12Q9HB15 430 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 ZIM2Q9NZV7 527 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 GPR160Q9UJ42 338 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 GAB2Q9UQC2 676 aa11.21□□□□□ -0.62
CCNA1-201ENST00000255465 POLR3HQ9Y535 204 aaPredicted RBP11.21□□□□□ -0.62
CCNA1-201ENST00000255465 BDP1A6H8Y1 2624 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 HHLA1C9JL84 531 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 ANHXE9PGG2 379 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 CACNB4O00305 520 aaPredicted RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 GPR171O14626 319 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 IMPA2O14732 288 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 ULK1O75385 1050 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 ITGA10O75578 1167 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 RP2O75695 350 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 NFKB1P19838 968 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 SSTR2P30874 369 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 DNAJA1P31689 397 aaKnown RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 SNRPEP62304 92 aaKnown RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 IFRD2Q12894 506 aaPredicted RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 HTR4Q13639 388 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 GRM3Q14832 879 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 UBXN2BQ14CS0 331 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 GOLGA7BQ2TAP0 167 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 INO80DQ53TQ3 878 aaPredicted RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 PARM1Q6UWI2 310 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 TRIM46Q7Z4K8 759 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 TMEM135Q86UB9 458 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 KLBQ86Z14 1044 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 SCAMP5Q8TAC9 235 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 TMEM163Q8TC26 289 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 FGF14Q92915 247 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 LCORQ96JN0 433 aaPredicted RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 C19orf43Q9BQ61 176 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 SIK2Q9H0K1 926 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 MVB12BQ9H7P6 319 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 AKTIPQ9H8T0 292 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 RCOR3Q9P2K3 495 aaPredicted RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 MBD1Q9UIS9 605 aaPredicted RBP11.2□□□□□ -0.62
CCNA1-201ENST00000255465 TSPAN16Q9UKR8 245 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 CA5BQ9Y2D0 317 aa11.2□□□□□ -0.62
CCNA1-201ENST00000255465 TRAPPC13A5PLN9 417 aa11.19□□□□□ -0.62
CCNA1-201ENST00000255465 MYO1GB0I1T2 1018 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms