RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PRSS41Q7RTY9 318 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 OR4N5Q8IXE1 308 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 CA13Q8N1Q1 262 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 LINC00471Q8N535 108 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 OR4D11Q8NGI4 311 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 SGCDQ92629 289 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 SLC38A3Q99624 504 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 DOK1Q99704 481 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 CCDC90BQ9GZT6 254 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 FAM60AQ9NP50 221 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 RASSF1Q9NS23 344 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 PAK1IP1Q9NWT1 392 aaPredicted RBP21.82■■□□□ 1.08
MSX2-201ENST00000239243 SLC13A4Q9UKG4 626 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 KCNE3Q9Y6H6 103 aa21.82■■□□□ 1.08
MSX2-201ENST00000239243 SOX1O00570 391 aaPredicted RBP21.81■■□□□ 1.08
MSX2-201ENST00000239243 PCDHGA12O60330 932 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 FAM20BO75063 409 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 DNAJB6O75190 326 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 GPR75O95800 540 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 PROS1P07225 676 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 RAB38P57729 211 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 SHC2P98077 582 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 GPR107Q5VW38 600 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 FAM81AQ8TBF8 368 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 GTPBP3Q969Y2 492 aaKnown RBP21.81■■□□□ 1.08
MSX2-201ENST00000239243 TCTN2Q96GX1 697 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 HSPA12BQ96MM6 686 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 ANKRA2Q9H9E1 313 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 CDC14AQ9UNH5 594 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 CLCA2Q9UQC9 943 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 COLQQ9Y215 455 aaPredicted RBP21.81■■□□□ 1.08
MSX2-201ENST00000239243 TRIOBPQ9H2D6 2365 aa21.81■■□□□ 1.08
MSX2-201ENST00000239243 A0A087WV62 115 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 TRBV4-1A0A0J9YWV2 114 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 SEMA7AO75326 666 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 GASTP01350 101 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 ZNF628Q5EBL2 1059 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 ZNF311Q5JNZ3 666 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 RBM45Q8IUH3 476 aaKnown RBP21.8■■□□□ 1.08
MSX2-201ENST00000239243 MCATQ8IVS2 390 aaKnown RBP21.8■■□□□ 1.08
MSX2-201ENST00000239243 ZNF540Q8NDQ6 660 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 C12orf43Q96C57 262 aaKnown RBP21.8■■□□□ 1.08
MSX2-201ENST00000239243 CACYBPQ9HB71 228 aaKnown RBP21.8■■□□□ 1.08
MSX2-201ENST00000239243 A4GNTQ9UNA3 340 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 C19orf53Q9UNZ5 99 aaPredicted RBP21.8■■□□□ 1.08
MSX2-201ENST00000239243 RNF6Q9Y252 685 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 A0A1W2PRQ8 180 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 M0R3H8 397 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 AQP9O43315 295 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 NXPH1P58417 271 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 DGCR6Q14129 220 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 LACC1Q8IV20 430 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 SVOPQ8N4V2 548 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 PRRC1Q96M27 445 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 CDX2Q99626 313 aaPredicted RBP21.8■■□□□ 1.08
MSX2-201ENST00000239243 FNDC11Q9BVV2 318 aa21.8■■□□□ 1.08
MSX2-201ENST00000239243 SLC9B1P1A6NJY1 282 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 WBP4O75554 376 aaKnown RBP21.79■■□□□ 1.08
MSX2-201ENST00000239243 POU2F1P14859 743 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 FOSL2P15408 326 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 KRT20P35900 424 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 TMBIM6P55061 237 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 CHRNEQ04844 493 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 NPTX1Q15818 432 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 NDUFA9Q16795 377 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 GTF2IRD2BQ6EKJ0 949 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 GTF2IRD2Q86UP8 949 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 C17orf82Q86X59 251 aaPredicted RBP21.79■■□□□ 1.08
MSX2-201ENST00000239243 MUL1Q969V5 352 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 SLC35A4Q96G79 324 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 LHPPQ9H008 270 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 TMEM74BQ9NUR3 256 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 LMO7DNF2Z398 122 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 FGF17O60258 216 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 OR10H3O60404 316 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 PCSK6P29122 969 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 UGT2B15P54855 530 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 CDC42P60953 191 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 DYNC1I2Q13409 638 aaKnown RBP21.79■■□□□ 1.08
MSX2-201ENST00000239243 MLIPQ5VWP3 458 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 KLHL17Q6TDP4 642 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 OLIG3Q7RTU3 272 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 TMEFF1Q8IYR6 380 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 SLC16A11Q8NCK7 471 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 OR5T3Q8NGG3 340 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 APH1BQ8WW43 257 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 CLDN23Q96B33 292 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 TBC1D17Q9HA65 648 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 IMPAD1Q9NX62 359 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 KLHL28Q9NXS3 571 aa21.79■■□□□ 1.08
MSX2-201ENST00000239243 RGS10O43665 173 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 PLOD3O60568 738 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 LDB3O75112 727 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 PCMT1P22061 227 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 PRKAR1BP31321 381 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 IDH2P48735 452 aaKnown RBP21.78■■□□□ 1.08
MSX2-201ENST00000239243 MVKQ03426 396 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 DEFB110Q30KQ9 67 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 ZCCHC12Q6PEW1 402 aa21.78■■□□□ 1.08
MSX2-201ENST00000239243 Q6ZPB1 254 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms