RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SORBS2O94875 1100 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 AGFG2O95081 481 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 CRYABP02511 175 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 JUNP05412 331 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 G6PDP11413 515 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 SSTR4P31391 388 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 CLDN8P56748 225 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 C21orf58P58505 322 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 SRSF11Q05519 484 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 MLC1Q15049 377 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 EBPQ15125 230 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 DPY19L1Q2PZI1 675 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 LSM12Q3MHD2 195 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF628Q5EBL2 1059 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 FAM180AQ6UWF9 173 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 RGS9BPQ6ZS82 235 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 LARP4Q71RC2 724 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■□□□ 12.6
SF3B6-201ENST00000233468 C9orf40Q8IXQ3 194 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF321PQ8N8H1 164 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF615Q8N8J6 731 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 CATSPER1Q8NEC5 780 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ADCY4Q8NFM4 1077 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 OR52R1Q8NGF1 315 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 CEP70Q8NHQ1 597 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 DNAJB8Q8NHS0 232 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 CLHC1Q8NHS4 586 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ACTRT2Q8TDY3 377 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 AMDHD1Q96NU7 426 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 RASL10BQ96S79 203 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ZBTB18Q99592 522 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 NPAS2Q99743 824 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 SIKE1Q9BRV8 207 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 DPY30Q9C005 99 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 BHLHE41Q9C0J9 482 aaPredicted RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 DDX18Q9NVP1 670 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF639Q9UID6 485 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 KLF13Q9Y2Y9 288 aaPredicted RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 COPG1Q9Y678 874 aaKnown RBP10.44□□□□□ -0.74
SF3B6-201ENST00000233468 USH1CQ9Y6N9 552 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 A0A1W2PS29 197 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 A1L4Q6 167 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 TMEM200CA6NKL6 621 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 HRKO00198 91 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 SDHDO14521 159 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 TP53I11O14683 189 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 POLR3GO15318 223 aaPredicted RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 PRKNO60260 465 aaPredicted RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 RASAL1O95294 804 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 F10P00742 488 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 F12P00748 615 aaPredicted RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 SP1P08047 785 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 CT62P0C5K7 136 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 IDO1P14902 403 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 S1PR1P21453 382 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 COL8A1P27658 744 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 IRX1P78414 480 aaPredicted RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 MGAT2Q10469 447 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 MRPL49Q13405 166 aaKnown RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 PTGR1Q14914 329 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 ZNHIT3Q15649 155 aaPredicted RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 INPP5JQ15735 1006 aaPredicted RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 EIF2S3LQ2VIR3 472 aaKnown RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 VPS26BQ4G0F5 336 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 TRMT12Q53H54 448 aaKnown RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 FHL5Q5TD97 284 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 ANXA8L1Q5VT79 327 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 SPINK14Q6IE38 97 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 FAM180BQ6P0A1 224 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 FAM111BQ6SJ93 734 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 RTL4Q6ZR62 310 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 BCORP1Q8N888 145 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 GOLM1Q8NBJ4 401 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 POGLUT1Q8NBL1 392 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 GALNT11Q8NCW6 608 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 MDS2Q8NDY4 140 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 C16orf52Q8NHV5 167 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 HSPBAP1Q96EW2 488 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 LCORQ96JN0 433 aaPredicted RBP10.43□□□□□ -0.74
SF3B6-201ENST00000233468 GLIPR2Q9H4G4 154 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 C3orf14Q9HBI5 128 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 NEUROD4Q9HD90 331 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 ANKRD10Q9NXR5 420 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 GIMAP2Q9UG22 337 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 PCDHGB4Q9UN71 923 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 CREBBPQ92793 2442 aa10.43□□□□□ -0.74
SF3B6-201ENST00000233468 DOCK10Q96BY6 2186 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 A0A1W2PRB8 838 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 TCP11X1B4DZS4 312 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 DYNC1I1O14576 645 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 UBDO15205 165 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 MAN1A2O60476 641 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 DIAPH2O60879 1101 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 NEURL1O76050 574 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 SOX30O94993 753 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 CBX7O95931 251 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 NAGAP17050 411 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 DRD5P21918 477 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 GPX3P22352 226 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 EPHA3P29320 983 aa10.42□□□□□ -0.74
SF3B6-201ENST00000233468 KRT20P35900 424 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms