RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 VASNQ6EMK4 673 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 HIST2H2AA3Q6FI13 130 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 SIGIRRQ6IA17 410 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TRAPPC5Q8IUR0 188 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ZNF547Q8IVP9 402 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 PEX5LQ8IYB4 626 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TCEAL8Q8IYN2 117 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ELMOD2Q8IZ81 293 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 SLC38A6Q8IZM9 456 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ARIH2OSQ8N7S6 290 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 DUSP18Q8NEJ0 188 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TMEM163Q8TC26 289 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 KLK6Q92876 244 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TEFMQ96QE5 360 aaKnown RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 FNDC11Q9BVV2 318 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 CFHR5Q9BXR6 569 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 RNF32Q9H0A6 362 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 CNIH4Q9P003 139 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 IL20RAQ9UHF4 553 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 CD8B2A6NJW9 211 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TEX28O15482 410 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 PDPK1O15530 556 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TMPRSS11DO60235 418 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 MMP20O60882 483 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 OR2B3O76000 313 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 STATHP02808 62 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 NR2F6P10588 404 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 CD8BP10966 210 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ACP2P11117 423 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ARSBP15848 533 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 GABRA5P31644 462 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 BSGP35613 385 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 CCR2P41597 374 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 MTNR1AP48039 350 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 PNLIPRP1P54315 467 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 PCBP4P57723 403 aaKnown RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 SLC7A9P82251 487 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 C19orf57Q0VDD7 668 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 ZNF155Q12901 538 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 CCDC85BQ15834 202 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 ZNF791Q3KP31 576 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 SPOUT1Q5T280 376 aaKnown RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 CD200R1LQ6Q8B3 271 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 LIPIQ6XZB0 460 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 FAM83HQ6ZRV2 1179 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 TRILQ7L0X0 811 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TRMT11Q7Z4G4 463 aaKnown RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 FAM129CQ86XR2 697 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 OR5P2Q8WZ92 322 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 SMPDL3AQ92484 453 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 UFD1Q92890 307 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 KIAA1143Q96AT1 154 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 KCNJ15Q99712 375 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 SAP130Q9H0E3 1048 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
NUP88-201ENST00000225696 TRIM45Q9H8W5 580 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
NUP88-201ENST00000225696 TMEM129A0AVI4 362 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 ZSCAN5BA6NJL1 495 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 GLOD5A6NK44 160 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 PAHP00439 452 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 CELP19835 753 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 PSMB5P28074 263 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 UQCRC1P31930 480 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 CCT3P49368 545 aaKnown RBP11.68□□□□□ -0.54
NUP88-201ENST00000225696 CLDN20P56880 219 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 ALDH6A1Q02252 535 aaKnown RBP11.68□□□□□ -0.54
NUP88-201ENST00000225696 FZD5Q13467 585 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 LHX8Q68G74 356 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 C1orf94Q6P1W5 598 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 FAM92BQ6ZTR7 304 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 PRICKLE2Q7Z3G6 844 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 BBS1Q8NFJ9 593 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 OR4M2Q8NGB6 313 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 OR5AR1Q8NGP9 310 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 TRIM63Q969Q1 353 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 TIFAQ96CG3 184 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 ZG16BQ96DA0 208 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 ZC3HAV1LQ96H79 300 aaKnown RBP11.68□□□□□ -0.54
NUP88-201ENST00000225696 ZNF649Q9BS31 505 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 MARVELD1Q9BSK0 173 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 TDP1Q9NUW8 608 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 SPG21Q9NZD8 308 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 A0A087WUU8 490 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 WASH3PC4AMC7 463 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 PRODHO43272 600 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 HOXA2O43364 376 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 AKAP8O43823 692 aaKnown RBP11.68□□□□□ -0.54
NUP88-201ENST00000225696 HCN1O60741 890 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 TSC22D2O75157 780 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 CHRM4P08173 479 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 ELFN1P0C7U0 828 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 FGF9P31371 208 aaPredicted RBP11.68□□□□□ -0.54
NUP88-201ENST00000225696 CA8P35219 290 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 RAB8AP61006 207 aa11.68□□□□□ -0.54
NUP88-201ENST00000225696 RRAS2P62070 204 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms