RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LINC00299Q6ZSB3 139 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF367Q7RTV3 350 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ABI3BPQ7Z7G0 1075 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 NLGN4XQ8N0W4 816 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 FLCNQ8NFG4 579 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 B3GNT7Q8NFL0 401 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 OR4K5Q8NGD3 323 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 OR6T1Q8NGN1 323 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 FLVCR1-AS1Q8TAF5 88 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 NDNFQ8TB73 568 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 TRUB1Q8WWH5 349 aaKnown RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 S100ZQ8WXG8 99 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 RSC1A1Q92681 617 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 KAT2AQ92830 837 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ZHX1-C8orf76Q96EF9 292 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 C16orf58Q96GQ5 468 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 OR2A5Q96R48 311 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ETAA1Q9NY74 926 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 USP36Q9P275 1121 aaKnown RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 LRP4O75096 1905 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 hCG_2014768A0A024R1R8 64 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 A0A0J9YY10 115 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 A0A1W2PS29 197 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CLDN25C9JDP6 229 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 P2RX6O15547 441 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 AIREO43918 545 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CTSVO60911 334 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 SEMA7AO75326 666 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 NADKO95544 446 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 EIF2S1P05198 315 aaKnown RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 INHBBP09529 407 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 PIPP12273 146 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CTSEP14091 401 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ALOX12P18054 663 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 GSTM3P21266 225 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 FUT4P22083 530 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 TGFBR2P37173 567 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CCR5P51681 352 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 BMXP51813 675 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 DGKEP52429 567 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 NCS1P62166 190 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CCINQ13939 588 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF846Q147U1 533 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 KIAA0895LQ68EN5 471 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ARMC6Q6NXE6 501 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CDC73Q6P1J9 531 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 FBXO42Q6P3S6 717 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 PODNL1Q6PEZ8 512 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 KLHL35Q6PF15 583 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 OLIG3Q7RTU3 272 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 TAF8Q7Z7C8 310 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 HMGN2P46Q86SG4 172 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 IQCHQ86VS3 1027 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 SLC44A3Q8N4M1 653 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 TMCO5AQ8N6Q1 288 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 B4GALNT2Q8NHY0 566 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 TM4SF19Q96DZ7 209 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 HSPBAP1Q96EW2 488 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 PLEKHA8Q96JA3 519 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CCDC3Q9BQI4 270 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 SLC38A1Q9H2H9 487 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF576Q9H609 170 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 C6orf106Q9H6K1 298 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 LYRM4Q9HD34 91 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 GIN1Q9NXP7 522 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 PTGFRNQ9P2B2 879 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 DAPP1Q9UN19 280 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 NDRG2Q9UN36 371 aaKnown RBP7.76□□□□□ -1.17
VAMP3-201ENST00000054666 CYP8B1Q9UNU6 501 aa7.76□□□□□ -1.17
VAMP3-201ENST00000054666 ARHGEF17Q96PE2 2063 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 AP3D1O14617 1153 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TPST2O60704 377 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PFDN1O60925 122 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RPLP0P05388 317 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 CCNYL3P0C7X3 344 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TNNI3P19429 210 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PRKAR1BP31321 381 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 BLKP51451 505 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RGS8P57771 180 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SNRPGP62308 76 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SIM1P81133 766 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ALDH6A1Q02252 535 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TFF2Q03403 129 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RELAQ04206 551 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 CHRNEQ04844 493 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 NR1D2Q14995 579 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TIMM50Q3ZCQ8 353 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 FCRL6Q6DN72 434 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 MFSD12Q6NUT3 480 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 FAM111BQ6SJ93 734 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RRM2BQ7LG56 351 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 DGLUCYQ7Z3D6 616 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PEX5LQ8IYB4 626 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TDHQ8IZJ6 230 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 KBTBD8Q8NFY9 601 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 OR8J1Q8NGP2 316 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 WDR36Q8NI36 951 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 BAHD1Q8TBE0 780 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 GPBAR1Q8TDU6 330 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PATE1Q8WXA2 126 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms