RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CRISP1P54107 249 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 TARDBPQ13148 414 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTNS-201ENST00000046640 LRRC32Q14392 662 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 CLPPQ16740 277 aaPredicted RBP12.39□□□□□ -0.43
CTNS-201ENST00000046640 FRMPD2BQ6IN97 320 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 TMEM107Q6UX40 140 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 DENND6BQ8NEG7 585 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 CREB3L4Q8TEY5 395 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 COL26A1Q96A83 441 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 AMDHD1Q96NU7 426 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
CTNS-201ENST00000046640 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 SLC6A20Q9NP91 592 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 FKBP14Q9NWM8 211 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
CTNS-201ENST00000046640 ACSL5Q9ULC5 683 aa12.39□□□□□ -0.43
CTNS-201ENST00000046640 A0A1W2PR48 441 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 DPM1O60762 260 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 RNGTTO60942 597 aaKnown RBP12.38□□□□□ -0.43
CTNS-201ENST00000046640 SEMA3DO95025 777 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 IGFALSP35858 605 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 BUD31P41223 144 aaPredicted RBP12.38□□□□□ -0.43
CTNS-201ENST00000046640 PPP2CBP62714 309 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 PPP2CAP67775 309 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 FBXO43Q4G163 708 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 CCDC190Q86UF4 302 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 ATCAYQ86WG3 371 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 RAB42Q8N4Z0 105 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 ZG16BQ96DA0 208 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 SLC35G5Q96KT7 338 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 OPALINQ96PE5 141 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 BTBD1Q9H0C5 482 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 ABCB9Q9NP78 766 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 MKLN1Q9UL63 735 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
CTNS-201ENST00000046640 ALPK3Q96L96 1907 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 BRWD1Q9NSI6 2320 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 SNX4O95219 450 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 C5AR1P21730 350 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 LIMS1P48059 325 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 RNF144AP50876 292 aaPredicted RBP12.38□□□□□ -0.43
CTNS-201ENST00000046640 OLR1P78380 273 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 HOXC5Q00444 222 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 TFF2Q03403 129 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 SLC9A5Q14940 896 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 TOR1AIP1Q5JTV8 583 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 DCST1Q5T197 706 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 PLAG1Q6DJT9 500 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 TRIM48Q8IWZ4 208 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 FRMD1Q8N878 549 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 ACOT4Q8N9L9 421 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 SLC7A13Q8TCU3 470 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 UBASH3BQ8TF42 649 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 QRFPRQ96P65 431 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 POLR2J2Q9GZM3 115 aaKnown RBP12.38□□□□□ -0.43
CTNS-201ENST00000046640 NEUROD4Q9HD90 331 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 SLC35C2Q9NQQ7 365 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 MALT1Q9UDY8 824 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 CFL2Q9Y281 166 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
CTNS-201ENST00000046640 K7EQS6 105 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 TLR4O00206 839 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 CDRT1O95170 752 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 EIF2S1P05198 315 aaKnown RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 HMGN2P05204 90 aaKnown RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 HTR3AP46098 478 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 CAV3P56539 151 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 NDUFA5Q16718 116 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 TBRG1Q3YBR2 411 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 SYCE2Q6PIF2 218 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 TMPRSS11AQ6ZMR5 421 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 ZNF517Q6ZMY9 492 aaPredicted RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 ZNF367Q7RTV3 350 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 CAMKK1Q8N5S9 505 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 OR6F1Q8NGZ6 308 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 KAT2AQ92830 837 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 TSACCQ96A04 125 aaPredicted RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 CNRIP1Q96F85 164 aaPredicted RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 OR2A14Q96R47 310 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 PCBD2Q9H0N5 130 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 C6orf106Q9H6K1 298 aaPredicted RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 HHATLQ9HCP6 504 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 TVP23BQ9NYZ1 205 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 YARS2Q9Y2Z4 477 aaKnown RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 A0A0A6YYD5 115 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 ANKRD34BA5PLL1 514 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 GUCY1B2O75343 617 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 SLITRK5O94991 958 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 ELAVL4P26378 380 aaKnown RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 PEBP1P30086 187 aaKnown RBP12.37□□□□□ -0.43
CTNS-201ENST00000046640 ITPRIPL2Q3MIP1 535 aa12.37□□□□□ -0.43
CTNS-201ENST00000046640 FAM131AQ6UXB0 335 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms