RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Tbx19Q99ME7 446 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Snrpb2Q9CQI7 225 aaKnown RBP7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Riok2Q9CQS5 547 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 NarfQ9CYQ7 462 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Nif3l1Q9EQ80 376 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Chrm3Q9ERZ3 589 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Cmtm7Q9ESD6 167 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Gal3st1Q9JHE4 423 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Pik3cgQ9JHG7 1102 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Ntn4Q9JI33 628 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Hey2Q9QUS4 339 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 CasrQ9QY96 1079 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Dcun1d1Q9QZ73 259 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 H2-BlV9GXR0 257 aa7.16□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Ttll9A2APC3 461 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Gm14124A2AU83 715 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Tyw5A2RSX7 315 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 A630073D07RikE9PWS6 100 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Gm14548E9Q1Z6 680 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Pira2F8VQ94 680 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Kcnk16G5E845 292 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 TpmtO55060 240 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Klc2O88448 599 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Hcn1O88704 910 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 ChrngP04760 519 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Sstr4P49660 385 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 ArsbP50429 534 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Tuba1cP68373 449 aaKnown RBP7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Serpinb5P70124 375 aaKnown RBP7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Ldb1P70662 411 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Psmb4P99026 264 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Slc17a7Q3TXX4 560 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 AbrQ5SSL4 859 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Nfatc2Q60591 927 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 MelkQ61846 643 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Zrsr2Q62377 462 aaKnown RBP7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Htr1aQ64264 421 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Stkld1Q80YS9 662 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Morc4Q8BMD7 928 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Rassf2Q8BMS9 326 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Zfp398Q8BV16 643 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Sall4Q8BX22 1067 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Fam53cQ8BXQ8 393 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 4932411N23RikQ8C0S0 470 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Slco6c1Q8C0X7 706 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Aph1bQ8C7N7 257 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Spats2Q8K1N4 545 aaKnown RBP7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Trpv3Q8K424 791 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Olfr350Q8VFP8 312 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Fitm1Q91V79 292 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Atad3Q925I1 591 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Trim8Q99PJ2 551 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Trim33Q99PP7 1142 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Lrrc40Q9CRC8 602 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Spaca7Q9D2S4 182 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Mrps9Q9D7N3 390 aaKnown RBP7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Tbc1d20Q9D9I4 402 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Prl8a1Q9DAV8 240 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Ndst3Q9EQH7 873 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 RhojQ9ER71 214 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Hes6Q9JHE6 224 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Slc39a1Q9QZ03 324 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Tmed2Q9R0Q3 201 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Ak1Q9R0Y5 194 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 GghQ9Z0L8 317 aa7.15□□□□□ -1.26
Scn8a-202ENSMUST00000096198 Ppp1r3dA2AJW4 279 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Olfr1066A2AK62 313 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Gbp11A9YVJ5 442 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Chrna10B2RX82 447 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 2310061I04RikB8JJ69 315 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Kif28pD3YXS5 1028 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Rnf212bD3Z423 297 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Lilra5D3Z7A9 295 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Gm3149E9PW52 257 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Gm21103E9Q2Q1 267 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Spata31d1cE9QAF1 853 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Gm3476K7N6V0 257 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Gm8362K7N6Y6 257 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 MstnO08689 376 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 AgxtO35423 414 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 CtsdP18242 410 aaKnown RBP7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Pou5f1P20263 352 aaKnown RBP7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 RxraP28700 467 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Rfc1P35601 1131 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Defb41Q30KP6 65 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 SbplQ3TUY3 232 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 StimateQ3UF25 288 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Kbtbd8Q3UQV5 599 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Wfdc5Q4KXB6 126 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Rtp3Q5QGU6 474 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Acvr1bQ61271 505 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Ssx9Q6XAS3 170 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Slc16a9Q7TM99 508 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Pik3ip1Q7TMJ8 264 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Cep104Q80V31 926 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 NagpaQ8BJ48 517 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Plppr5Q8BJ52 321 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Eme1Q8BJW7 570 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 Fam177a1Q8BR63 207 aa7.14□□□□□ -1.27
Scn8a-202ENSMUST00000096198 MaelQ8BVN9 434 aa7.14□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms