RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SF3B6Q9Y3B4 125 aaKnown RBP13.05□□□□□ -0.32
PHGDH-233ENST00000642021 UNC80Q8N2C7 3258 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 GLOD5A6NK44 160 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 PRRT4C9JH25 899 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 LZTS3O60299 673 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-233ENST00000642021 RAB36O95755 333 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 IL1AP01583 271 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 NR2F1P10589 423 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ALPPL2P10696 532 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ITGB8P26012 769 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 DDOSTP39656 456 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 CDK5Q00535 292 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 BNC1Q01954 994 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 GPR19Q15760 415 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 SNAPC1Q16533 368 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.05□□□□□ -0.325e-8■■■□□ 19.2
PHGDH-233ENST00000642021 ABI3BPQ7Z7G0 1075 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 CAMKK1Q8N5S9 505 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 ZFP41Q8N8Y5 198 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 IL17RCQ8NAC3 791 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 HCAR2Q8TDS4 363 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 KATNB1Q9BVA0 655 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 BEX2Q9BXY8 128 aa13.05□□□□□ -0.32
PHGDH-233ENST00000642021 NUFIP1Q9UHK0 495 aaKnown RBP13.05□□□□□ -0.32
PHGDH-233ENST00000642021 CENPXA8MT69 81 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 PLA2G10O15496 165 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 TBX19O60806 448 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 ADH1AP07327 375 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 DDX5P17844 614 aaKnown RBP13.04□□□□□ -0.32
PHGDH-233ENST00000642021 KELP23276 732 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 CXCR2P25025 360 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 PRKAG1P54619 331 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 ALDH6A1Q02252 535 aaKnown RBP13.04□□□□□ -0.32
PHGDH-233ENST00000642021 SCN1BQ07699 218 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 MAP4K2Q12851 820 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 DHCR24Q15392 516 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 SFTPA1Q8IWL2 248 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 ZBED6CLQ96FA7 236 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-233ENST00000642021 DCLRE1CQ96SD1 692 aaKnown RBP13.04□□□□□ -0.32
PHGDH-233ENST00000642021 MACROD1Q9BQ69 325 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 AICDAQ9GZX7 198 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 RANGRFQ9HD47 186 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-233ENST00000642021 TBC1D14Q9P2M4 693 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 LRRK1Q38SD2 2015 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 FAM172BPA6NC97 362 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 HMX3A6NHT5 357 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 B4DXG7 233 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 TMCC2O75069 709 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 CHRM4P08173 479 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 LINC00271P0C7V0 271 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
PHGDH-233ENST00000642021 FUT5Q11128 374 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 ZNF750Q32MQ0 723 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 C1orf94Q6P1W5 598 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 CD300LDQ6UXZ3 194 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 PDZD3Q86UT5 571 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 LAPTM4BQ86VI4 370 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 OR52P1PQ8NH57 321 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 LILRB4Q8NHJ6 448 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 ING5Q8WYH8 240 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 SLC9A6Q92581 669 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 AIF1LQ9BQI0 150 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 MENTQ9BUN1 341 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 TOR4AQ9NXH8 423 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 P2RX2Q9UBL9 471 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 GPR34Q9UPC5 381 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 NOTCH4Q99466 2003 aa13.04□□□□□ -0.32
PHGDH-233ENST00000642021 A0A1W2PPV9 198 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 LGI1O95970 557 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 TSPAN19P0C672 248 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 GPC1P35052 558 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 KIR2DL3P43628 341 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 MAN2A2P49641 1150 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SMIM11AP58511 58 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 MLLT1Q03111 559 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 COX10Q12887 443 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ASAH1Q13510 395 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 CRTC2Q53ET0 693 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 Q5BKY6 102 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 FAM209AQ5JX71 171 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SLC25A30Q5SVS4 291 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 XKRXQ6PP77 449 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 VASH1Q7L8A9 365 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 TRIM48Q8IWZ4 208 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 FAM20CQ8IXL6 584 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ZNF557Q8N988 423 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 GALNT6Q8NCL4 622 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 OR8D4Q8NGM9 314 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ZG16BQ96DA0 208 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 HHIPL1Q96JK4 782 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 GDF15Q99988 308 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ZDHHC4Q9NPG8 344 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ZCCHC3Q9NUD5 404 aaKnown RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 PAQR5Q9NXK6 330 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 MARK1Q9P0L2 795 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 TBX21Q9UL17 535 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 KCNE3Q9Y6H6 103 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 COL4A3Q01955 1670 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms