RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	RAP2B	P61225	183 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	STX1B	P61266	288 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	RPL7A	P62424	266 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	TMEM115	Q12893	351 aa	Predicted RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	TRAP1	Q12931	704 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	MFAP5	Q13361	173 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	CTBP1	Q13363	440 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	ALCAM	Q13740	583 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	BOP1	Q14137	746 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	DHX34	Q14147	1143 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	RAB39A	Q14964	217 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	NCF4	Q15080	339 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	SNCB	Q16143	134 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	ZNF699	Q32M78	642 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	CST9LP1	Q5W188	147 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	TMEM53	Q6P2H8	277 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	FAM198B	Q6UWH4	519 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	RBM43	Q6ZSC3	357 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	KCTD9	Q7L273	389 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	SPATA19	Q7Z5L4	167 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	PPP1R32	Q7Z5V6	425 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	SLC15A3	Q8IY34	581 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	ZNF679	Q8IYX0	411 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	RBM15B	Q8NDT2	890 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	C7orf57	Q8NEG2	295 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	OR52E1	Q8NGJ3	308 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	OR8K5	Q8NH50	307 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	HUS1B	Q8NHY5	278 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	RSC1A1	Q92681	617 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	ELP4	Q96EB1	424 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	GPR137	Q96N19	417 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	WDFY2	Q96P53	400 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	ACCS	Q96QU6	501 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	SMC6	Q96SB8	1091 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	PSMB7	Q99436	277 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	BEX2	Q9BXY8	128 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	RIBC2	Q9H4K1	309 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	LRRC4	Q9HBW1	653 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	TMEM184C	Q9NVA4	438 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	EMC3	Q9P0I2	261 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	HESX1	Q9UBX0	185 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	MTRF1L	Q9UGC7	380 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	STK38L	Q9Y2H1	464 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	PADI2	Q9Y2J8	665 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	ATP6V1D	Q9Y5K8	247 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	COMMD3-BMI1	R4GMX3	469 aa		4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	MDC1	Q14676	2089 aa	Known RBP	4.81	□□□□□ -1.64
CASC19-256	ENST00000641746	SON	P18583	2426 aa	Known RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	TCRBV7S2A1N4T	A0A589	114 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	GSAP	A4D1B5	854 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	OR6C74	A6NCV1	312 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MFSD2B	A6NFX1	497 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	NDUFS8	O00217	210 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	RASGRF2	O14827	1237 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	EIF3D	O15371	548 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	SULT1B1	O43704	296 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	CIDEA	O60543	219 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	GUCY1B2	O75343	617 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	KLF7	O75840	302 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	GPANK1	O95872	356 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	BMP15	O95972	392 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	FYN	P06241	537 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	HOXC4	P09017	264 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	UROS	P10746	265 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	ERCC2	P18074	760 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	PRKACB	P22694	351 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	GCSH	P23434	173 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	TTK	P33981	857 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	KHK	P50053	298 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	TNFSF10	P50591	281 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	B2M	P61769	119 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	HSD11B2	P80365	405 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	ADIG	Q0VDE8	80 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MSLN	Q13421	630 aa	Predicted RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	OLIG2	Q13516	323 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	PTCHD3	Q3KNS1	767 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	TMEM52B	Q4KMG9	183 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MTX3	Q5HYI7	312 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	RABGAP1L	Q5R372	815 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MLIP	Q5VWP3	458 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	LIPN	Q5VXI9	398 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	LIPM	Q5VYY2	423 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	ARHGAP17	Q68EM7	881 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	PDPK2P	Q6A1A2	396 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MSANTD2	Q6P1R3	559 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	ZNF529	Q6P280	563 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	BLOC1S2	Q6QNY1	142 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	AFTPH	Q6ULP2	937 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	CERS6	Q6ZMG9	384 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	PAQR7	Q86WK9	346 aa		4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	MEX3D	Q86XN8	651 aa	Known RBP	4.8	□□□□□ -1.64
CASC19-256	ENST00000641746	SLC22A9	Q8IVM8	553 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms