RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SELENOPP49908 381 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.32
SCARB2-227ENST00000640957 PGBD3Q8N328 593 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 WDR48Q8TAF3 677 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 SLC7A13Q8TCU3 470 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 CD99L2Q8TCZ2 262 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 DDOQ99489 341 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 MAPKAP1Q9BPZ7 522 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 TMEM45AQ9NWC5 275 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 CFAP97Q9P2B7 532 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 GSTK1Q9Y2Q3 226 aa13.02□□□□□ -0.32
SCARB2-227ENST00000640957 IGLV3-10A0A075B6K4 115 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 TEX51A0A1B0GUA7 166 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 A0A1B0GVM2 712 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 A0A1W2PRG6 482 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 C1orf226A1L170 272 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 RTCAO00442 366 aaKnown RBP13.02□□□□□ -0.33
SCARB2-227ENST00000640957 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-227ENST00000640957 SIX6O95475 246 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 ALDOBP05062 364 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 CKMP06732 381 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 HSD3B1P14060 373 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 SLC11A1P49279 550 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 ERVK-21P61565 698 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 MLLT11Q13015 90 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-227ENST00000640957 SYT14P1Q58G82 188 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 HECTD3Q5T447 861 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 MRPL10Q7Z7H8 261 aaKnown RBP13.02□□□□□ -0.33
SCARB2-227ENST00000640957 C11orf96Q7Z7L8 435 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 TMPRSS11BQ86T26 416 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 IQCHQ86VS3 1027 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF687Q8N1G0 1237 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 GANCQ8TET4 914 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 HSD17B8Q92506 261 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 UROC1Q96N76 676 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 NLNQ9BYT8 704 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 OR51J1Q9H342 316 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 KCMF1Q9P0J7 381 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 PTGFRNQ9P2B2 879 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 UBQLN2Q9UHD9 624 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 ENPP4Q9Y6X5 453 aa13.02□□□□□ -0.33
SCARB2-227ENST00000640957 SLC38A8A6NNN8 435 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 C5orf58C9J3I9 102 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 TOR1AO14656 332 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 HPXP02790 462 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 EIF4EP06730 217 aaKnown RBP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 EPHX1P07099 455 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 CYBAP13498 195 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 CR2P20023 1033 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 PRKAG1P54619 331 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 TSPAN5P62079 268 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 HSPB3Q12988 150 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 FAAP20Q6NZ36 180 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 PROKR2Q8NFJ6 384 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 KLK6Q92876 244 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 ORAI3Q9BRQ5 295 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 DNAJC11Q9NVH1 559 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 FBXL2Q9UKC9 423 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 MYO15AQ9UKN7 3530 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 DOCK4Q8N1I0 1966 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 FNDC1Q4ZHG4 1894 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 SLC43A1O75387 559 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 RECKO95980 971 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 ITGB7P26010 798 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 PCGF2P35227 344 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 SLC16A1P53985 500 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 TAS2R50P59544 299 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 RAE1P78406 368 aaKnown RBP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 SIM1P81133 766 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 MTAPQ13126 283 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 HYAL4Q2M3T9 481 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 NDUFAF5Q5TEU4 345 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 RTL4Q6ZR62 310 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF740Q8NDX6 193 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 WFDC5Q8TCV5 224 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 SLC5A11Q8WWX8 675 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 SCAMP4Q969E2 229 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 UCN3Q969E3 161 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 ABHD1Q96SE0 405 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 WRAP53Q9BUR4 548 aaKnown RBP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 KCNE1BA0A087WTH5 132 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 DRGXA6NNA5 263 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 M0R233 179 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 CD160O95971 181 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 F11P03951 625 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 KLK1P06870 262 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 PTHLHP12272 177 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 ANXA3P12429 323 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 OSMP13725 252 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 HMGCLP35914 325 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 TIGD3Q6B0B8 471 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 BBS1Q8NFJ9 593 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 LHFPL5Q8TAF8 219 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 GEMIN6Q8WXD5 167 aaKnown RBP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 UFD1Q92890 307 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 KLHL15Q96M94 604 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms