RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GNGT2O14610 69 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 SSX5O60225 188 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 HOXC4P09017 264 aaPredicted RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 ETFAP13804 333 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 ISL1P61371 349 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 RGNQ15493 299 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 PRRT3Q5FWE3 981 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 VTCN1Q7Z7D3 282 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 SERPINA11Q86U17 422 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 POC5Q8NA72 575 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 OR10G6Q8NH81 332 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 CREB3L4Q8TEY5 395 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 EXOSC8Q96B26 276 aaKnown RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 TEFMQ96QE5 360 aaKnown RBP10.89□□□□□ -0.67
CLN6-217ENST00000636964 RAB11FIP5Q9BXF6 653 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 SRMSQ9H3Y6 488 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 GPATCH2Q9NW75 528 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 ADPRHL2Q9NX46 363 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 MAP4K5Q9Y4K4 846 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
CLN6-217ENST00000636964 A0A0G2JMP0 313 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 C4orf51C9J302 202 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 hCG_2039718K7EN88 272 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 POLR1CO15160 346 aaPredicted RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 GPR37L1O60883 481 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 DLGAP3O95886 979 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 CHRM5P08912 532 aaPredicted RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 PTGER1P34995 402 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 GRK3P35626 688 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 DGKEP52429 567 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 PDE7AQ13946 482 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 COLEC12Q5KU26 742 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 NXNL2Q5VZ03 156 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 SHQ1Q6PI26 577 aaKnown RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 ZNF761Q86XN6 746 aaPredicted RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 C8orf59Q8N0T1 100 aaPredicted RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 CNIH3Q8TBE1 160 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 RGMAQ96B86 450 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 FOXQ1Q9C009 403 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 ZC4H2Q9NQZ6 224 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 CPNE7Q9UBL6 633 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 OSGIN1Q9UJX0 560 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 FANCMQ8IYD8 2048 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 SCN3AQ9NY46 2000 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 RAB19A4D1S5 217 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 LRIT2A6NDA9 550 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 CAPN5O15484 640 aaPredicted RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 DEAF1O75398 565 aaPredicted RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 DIRAS1O95057 198 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 SELLP14151 372 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 IL9P15248 144 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 SSR2P43308 183 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 RAB8AP61006 207 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 SGCAQ16586 387 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 SLC9A6Q92581 669 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 NODALQ96S42 347 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 KIR3DX1Q9H7L2 352 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 SLAMF7Q9NQ25 335 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 ERVK-18Q9QC07 812 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 PCDHGA10Q9Y5H3 936 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 HEBP2Q9Y5Z4 205 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 MAU2Q9Y6X3 613 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 MDC1Q14676 2089 aaKnown RBP10.88□□□□□ -0.67
CLN6-217ENST00000636964 MUC3AQ02505 3323 aa10.88□□□□□ -0.67
CLN6-217ENST00000636964 A0A0X1KG70 313 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 A8MV72 311 aaPredicted RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 M0R3G1 203 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 ERI3O43414 337 aaKnown RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 F3P13726 295 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 APEHP13798 732 aaKnown RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 CHI3L1P36222 383 aaPredicted RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 GABARAPL2P60520 117 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 SMAD2Q15796 467 aaKnown RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 SLC5A12Q1EHB4 618 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 RSBN1Q5VWQ0 802 aaPredicted RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 KIAA0895LQ68EN5 471 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 FCRLBQ6BAA4 426 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 OR4C11Q6IEV9 310 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 ZNF793Q6ZN11 406 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 FKBP9P1Q75LS8 142 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 ADCK1Q86TW2 530 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 ASCC1Q8N9N2 400 aaKnown RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 TSTD1Q8NFU3 115 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 OR8K5Q8NH50 307 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 PYURFQ96I23 114 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 CMTM3Q96MX0 182 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 ZNF282Q9UDV7 671 aaPredicted RBP10.87□□□□□ -0.67
CLN6-217ENST00000636964 ENOPH1Q9UHY7 261 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 MAPRE3Q9UPY8 281 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 TRBC2A0A5B9 178 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 PRAMEF26H0Y7S4 382 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 PRAMEF10O60809 474 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 CCNKO75909 580 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 CCNDBP1O95273 360 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 THEGLP0DJG4 465 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 PRKACGP22612 351 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 MAOBP27338 520 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 CMPK1P30085 196 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 KDELR2P33947 212 aa10.87□□□□□ -0.67
CLN6-217ENST00000636964 ILF3Q12906 894 aaKnown RBP eCLIP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms