RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MEF2AQ02078 507 aaPredicted RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 DSC1Q08554 894 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 TPBGQ13641 420 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ZNF791Q3KP31 576 aaPredicted RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 GGTA1PQ4G0N0 100 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 RNF219Q5W0B1 726 aaPredicted RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 C12orf73Q69YU5 71 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 GPR135Q8IZ08 494 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 CXorf58Q96LI9 332 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 OR4K3Q96R72 315 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 PARK7Q99497 189 aaKnown RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 PRR14Q9BWN1 585 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 RNF32Q9H0A6 362 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 SGK2Q9HBY8 427 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 SLC35C2Q9NQQ7 365 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 LYARQ9NX58 379 aaKnown RBP14.38□□□□□ -0.11
PMS1-221ENST00000624204 OR6C2Q9NZP2 312 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 MGAT4BQ9UQ53 548 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 GON4LQ3T8J9 2241 aa14.38□□□□□ -0.11
PMS1-221ENST00000624204 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 STK25O00506 426 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 KDELR3O43731 214 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 F2P00734 622 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 H1F0P07305 194 aaKnown RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 ELAVL4P26378 380 aaKnown RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 SLC16A1P53985 500 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 RPS7P62081 194 aaKnown RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 ZNF177Q13360 481 aaPredicted RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 ARHGAP15Q53QZ3 475 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 CRB2Q5IJ48 1285 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 C3orf38Q5JPI3 329 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 KIAA1161Q6NSJ0 714 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 LRFN4Q6PJG9 635 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 DBF4BQ8NFT6 615 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 GIMAP1Q8WWP7 306 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 ARMC5Q96C12 935 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 NARS2Q96I59 477 aaKnown RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 PTGFRNQ9P2B2 879 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 DSPPQ9NZW4 1301 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 TCRBV16S1A1N1A0A5B0 115 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 C7orf66A4D0T2 115 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 HLA-DPB1P04440 258 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 OR12D1P0DN82 309 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 CCR7P32248 378 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 ASMTP46597 345 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 OR1G1P47890 313 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 B2MP61769 119 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 ZNF33BQ06732 778 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 RFLNAQ6ZTI6 216 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 RAET1EQ8TD07 263 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 ZNF416Q9BWM5 594 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 DLL4Q9NR61 685 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 PCDHB16Q9NRJ7 776 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 C1GALT1Q9NS00 363 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 PAPPA2Q9BXP8 1791 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 E7EQ34 232 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 BCHEP06276 602 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 CSNK1DP48730 415 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 KIAA1024LP59773 190 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 BAMBIQ13145 260 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 PIN1Q13526 163 aaPredicted RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 ST3GAL2Q16842 350 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 IZUMO1Q8IYV9 350 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 PLA2G15Q8NCC3 412 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 SFXN2Q96NB2 322 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 OR2M2Q96R28 347 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 DDOQ99489 341 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 WRAP53Q9BUR4 548 aaKnown RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 SPATA6Q9NWH7 488 aaPredicted RBP14.37□□□□□ -0.11
PMS1-221ENST00000624204 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 C5AR2Q9P296 337 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 TMEM5Q9Y2B1 443 aa14.37□□□□□ -0.11
PMS1-221ENST00000624204 GAPDHSO14556 408 aaPredicted RBP14.36□□□□□ -0.11
PMS1-221ENST00000624204 SLC19A2O60779 497 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 APOC3P02656 99 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 DGKGP49619 791 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 PSEN2P49810 448 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 GRIN2CQ14957 1233 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 OCLNQ16625 522 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 C11orf96Q7Z7L8 435 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 VRK3Q8IV63 474 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 TOMM5Q8N4H5 51 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 OXR1Q8N573 874 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 FOPNLQ96NB1 174 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 PI15O43692 258 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 F11P03951 625 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 ALDOBP05062 364 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 EIF4EP06730 217 aaKnown RBP14.36□□□□□ -0.11
PMS1-221ENST00000624204 OC90Q02509 493 aaPredicted RBP14.36□□□□□ -0.11
PMS1-221ENST00000624204 OPCMLQ14982 345 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 ZNF630Q2M218 657 aaPredicted RBP14.36□□□□□ -0.11
PMS1-221ENST00000624204 SPIN4Q56A73 249 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 NDUFAF5Q5TEU4 345 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 PGBD2Q6P3X8 592 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 ALKAL2Q6UX46 152 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 MMP21Q8N119 569 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 ZNF527Q8NB42 609 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 SLC7A13Q8TCU3 470 aa14.36□□□□□ -0.11
PMS1-221ENST00000624204 HSD17B8Q92506 261 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms