RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CD9P21926 228 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 PDHA2P29803 388 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SOX2P48431 317 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 GABARAPL2P60520 117 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ABHD18Q0P651 414 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC14A1Q13336 389 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 INAVAQ3KP66 663 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 C5orf22Q49AR2 442 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEM107Q6UX40 140 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 RASSF6Q6ZTQ3 369 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 PEG10Q86TG7 708 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 OR4K14Q8NGD5 310 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CHPT1Q8WUD6 406 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 BCL7CQ8WUZ0 217 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ZDHHC12Q96GR4 267 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 NECTIN4Q96NY8 510 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CPPED1Q9BRF8 314 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF304Q9HCX3 659 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CHMP1AQ9HD42 196 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 PISDQ9UG56 409 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 A0A096LPI6 279 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 A0A0A6YYC8 382 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 DAPL1A0PJW8 107 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 I3L1I5 382 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MAN2B1O00754 1011 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ADAMDEC1O15204 470 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 RGS10O43665 173 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SOCS5O75159 536 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SDC1P18827 310 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CLDN8P56748 225 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CD300CQ08708 224 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 EIF4HQ15056 248 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 DECR1Q16698 335 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM26DQ5JW98 314 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CPZQ66K79 652 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 NIPAL1Q6NVV3 410 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ERICH5Q6P6B1 374 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 B3GNT8Q7Z7M8 397 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 BOLLQ8N9W6 283 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 OR10G2Q8NGC3 310 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 FIBINQ8TAL6 211 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 DIO2Q92813 273 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MAL2Q969L2 176 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SCRN2Q96FV2 425 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 TM9SF2Q99805 663 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 WDR12Q9GZL7 423 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 POLR2J2Q9GZM3 115 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SNTG1Q9NSN8 517 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 INTS6Q9UL03 887 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 VWA8A3KMH1 1905 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 DUXAA6NLW8 204 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 FRS3O43559 492 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 PRMT3O60678 531 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 IFI30P13284 250 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 ITIH1P19827 911 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 PSMB5P28074 263 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 EPHA2P29317 976 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 GRPRP30550 384 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 TGFBR1P36897 503 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 GALK2Q01415 458 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC3A1Q07837 685 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM131AQ6UXB0 335 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC16A12Q6ZSM3 486 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 TRIM46Q7Z4K8 759 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 PJA1Q8NG27 643 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 HCAR2Q8TDS4 363 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 RPL3LQ92901 407 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 HIST1H2AAQ96QV6 131 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 NTMT1Q9BV86 223 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 IRF2BPLQ9H1B7 796 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SDHAF3Q9NRP4 125 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF282Q9UDV7 671 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEFF2Q9UIK5 374 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF222Q9UK12 451 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 PPT2Q9UMR5 302 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 NOX1Q9Y5S8 564 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 C2orf74A8MZ97 194 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 PRODHO43272 600 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 TBX1O43435 398 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 PSMA1P25786 263 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 RBMS1P29558 406 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SFTPDP35247 375 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 KHKP50053 298 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 DAPP51397 102 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 RPS3AP61247 264 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 FLYWCH1Q4VC44 716 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 RAET1LQ5VY80 246 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 LAIR2Q6ISS4 152 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 CLECL1Q8IZS7 167 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 DIRAS2Q96HU8 199 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 HSH2DQ96JZ2 352 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM83CQ9BQN1 747 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SRA1Q9HD15 236 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 SPIN1Q9Y657 262 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 HTTP42858 3142 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 CIB4A0PJX0 185 aa7.86□□□□□ -1.15
PTPDC1-204ENST00000620992 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms