RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SLC25A25Q6KCM7 469 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 REEP3Q6NUK4 255 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TPGS1Q6ZTW0 290 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TECPR1Q7Z6L1 1165 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 LAS2Q8IYD9 372 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ADGRF3Q8IZF5 1079 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 OXR1Q8N573 874 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 OR7G3Q8NG95 312 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 MOSPD2Q8NHP6 518 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 LHFPL5Q8TAF8 219 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TMEM163Q8TC26 289 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SLC7A13Q8TCU3 470 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 GIMAP1Q8WWP7 306 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SCAMP4Q969E2 229 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CREB3L1Q96BA8 519 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TMEM19Q96HH6 336 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SUSD3Q96L08 255 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SLC6A18Q96N87 628 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 HTATIP2Q9BUP3 242 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 WRAP53Q9BUR4 548 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 OR10A4Q9H209 315 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 REEP4Q9H6H4 257 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ELAC1Q9H777 363 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 PPP1R3EQ9H7J1 279 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 BRD7Q9NPI1 651 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 GPATCH2Q9NW75 528 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TRPM5Q9NZQ8 1165 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CNIH4Q9P003 139 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 MGAT4BQ9UQ53 548 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 RASD1Q9Y272 281 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TMEM5Q9Y2B1 443 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CCL15-CCL14A0A0B4J2E2 113 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 A0A1B0GVM2 712 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CPSF4LA6NMK7 179 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 TOR1AO14656 332 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SMAD9O15198 467 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 TCRBP04435 133 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TPOP07202 933 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 H2AFB2P0C5Z0 115 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 NAGAP17050 411 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ATF6P18850 670 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CR2P20023 1033 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CD22P20273 847 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 PAICSP22234 425 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 ITGB7P26010 798 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SHC1P29353 583 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 BLVRAP53004 296 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SNTB2Q13425 540 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 CCL15Q16663 113 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ZNF630Q2M218 657 aaPredicted RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 COL28A1Q2UY09 1125 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CLVS2Q5SYC1 327 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 KIAA1841Q6NSI8 718 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SLC30A6Q6NXT4 461 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 PODNL1Q6PEZ8 512 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 NCEH1Q6PIU2 408 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 AGTRAPQ6RW13 159 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 PRSS45Q7RTY3 260 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SYT9Q86SS6 491 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 MEIOBQ8N635 442 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 DUSP18Q8NEJ0 188 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 DBF4BQ8NFT6 615 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 WDR48Q8TAF3 677 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SPRYD4Q8WW59 207 aaPredicted RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 UCN3Q969E3 161 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 TMEM159Q96B96 161 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SENP5Q96HI0 755 aaPredicted RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 ZSWIM3Q96MP5 696 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SFXN2Q96NB2 322 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ZNF582Q96NG8 517 aaPredicted RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 SLC38A2Q96QD8 506 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ATF6BQ99941 703 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 FUZQ9BT04 418 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 GSDMCQ9BYG8 508 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 THSD1Q9NS62 852 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SDHAF2Q9NX18 166 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 NLGN3Q9NZ94 848 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 FLVCR2Q9UPI3 526 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 LSM2Q9Y333 95 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 PIKFYVEQ9Y2I7 2098 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 FXYD6-FXYD2A0A087WZ82 144 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 A0A0B4J203 849 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ANHXE9PGG2 379 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 FFAR1O14842 300 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 PRMT3O60678 531 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SIX6O95475 246 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 MPC2O95563 127 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 LALBAP00709 142 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 URODP06132 367 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 CPEP16870 476 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TIA1P31483 386 aaKnown RBP eCLIP6.31□□□□□ -1.4
LMO3-235ENST00000616247 ACVR1BP36896 505 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 CSKP41240 450 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TPMTP51580 245 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 OR10A3P58181 314 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ILKQ13418 452 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLBPQ14493 270 aaKnown RBP eCLIP6.31□□□□□ -1.4
LMO3-235ENST00000616247 PUM1Q14671 1186 aaKnown RBP eCLIP6.31□□□□□ -1.4
LMO3-235ENST00000616247 CCL14Q16627 93 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 C19orf48Q6RUI8 117 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms