RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 KAT8Q9H7Z6 458 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 FBXL3Q9UKT7 428 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 CARD8Q9Y2G2 431 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SNX11Q9Y5W9 270 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 A0A096LPI6 279 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 CAPNS1P04632 268 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SRPRAP08240 638 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 ZNF24P17028 368 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 FPR1P21462 350 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 C21orf33P30042 268 aaPredicted RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 CXCL12P48061 93 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 PRKXP51817 358 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 PPP2CBP62714 309 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 PPP2CAP67775 309 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 POU6F2P78424 691 aaPredicted RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 ZP2Q05996 745 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ILF2Q12905 390 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 SRSF5Q13243 272 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 C22orf42Q6IC83 251 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ZNF613Q6PF04 617 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SBSNQ6UWP8 590 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 NRROSQ86YC3 692 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ZNF101Q8IZC7 436 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ECHDC3Q96DC8 303 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 RANBP9Q96S59 729 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 MAP3K3Q99759 626 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ZNF559Q9BR84 538 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 DHRS4Q9BTZ2 278 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 DEFB126Q9BYW3 111 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 MCCC2Q9HCC0 563 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 PARPBPQ9NWS1 579 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 VNN3Q9NY84 501 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SPHK1Q9NYA1 384 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 GDE1Q9NZC3 331 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 LAMB1P07942 1786 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 PI4KAP42356 2102 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SONP18583 2426 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 TRAV27A0A087WT01 109 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 A0A1B0GTW7 788 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ZNF726A6NNF4 738 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 H7C1C5 153 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 MAGEB3O15480 346 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ANXA8P13928 327 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 DNAJB1P25685 340 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ACADVLP49748 655 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TPTEP56180 551 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 GSCP56915 257 aaPredicted RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 HNRNPKP61978 463 aaKnown RBP eCLIP3.6□□□□□ -1.83
LTN1-207ENST00000614971 LCN6P62502 163 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ABATP80404 500 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 GSTM4Q03013 218 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TAP2Q03519 686 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ST3GAL3Q11203 375 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 GPR18Q14330 331 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SGCAQ16586 387 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ANKDD1AQ495B1 522 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SCGB2B2Q4G0G5 96 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 RBM48Q5RL73 367 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 KIAA1614Q5VZ46 1190 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ASRGL1Q7L266 308 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TMED4Q7Z7H5 227 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 OR4K5Q8NGD3 323 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 OR52E2Q8NGJ4 325 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 VN1R3Q9BXE9 311 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 RNF121Q9H920 327 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 MED20Q9H944 212 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TCF7L1Q9HCS4 588 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 DMRT3Q9NQL9 472 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TAAR2Q9P1P5 351 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TBC1D29Q9UFV1 150 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 HCN4Q9Y3Q4 1203 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TRAV6A0A075B6T7 132 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 IGHV3-64DA0A0J9YX35 117 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 LSM1O15116 133 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 CPNE6O95741 557 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 SOX3P41225 446 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TSPAN5P62079 268 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 DLX2Q07687 328 aaPredicted RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 TRAP1Q12931 704 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 HERC3Q15034 1050 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 QPRTQ15274 297 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ALG10BQ5I7T1 473 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 WDR45BQ5MNZ6 344 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TBPL2Q6SJ96 375 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 KANSL1Q7Z3B3 1105 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 KLBQ86Z14 1044 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 GALNT15Q8N3T1 639 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ANKFN1Q8N957 763 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TEX19Q8NA77 164 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 RAB7BQ96AH8 199 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 ZFYVE21Q9BQ24 234 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 DOHHQ9BU89 302 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 POLDIP3Q9BY77 421 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 SLC2A11Q9BYW1 496 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 PHF11Q9UIL8 331 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 FARSAQ9Y285 508 aaKnown RBP3.6□□□□□ -1.83
LTN1-207ENST00000614971 TMED5Q9Y3A6 229 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 FAM221BA6H8Z2 402 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 TVP23AA6NH52 213 aa3.6□□□□□ -1.83
LTN1-207ENST00000614971 CLDN24A6NM45 220 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms