RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ABCG4Q9H172 646 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 EGLN3Q9H6Z9 239 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 TMEM27Q9HBJ8 222 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 MYNNQ9NPC7 610 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC35C2Q9NQQ7 365 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 INIPQ9NRY2 104 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 ACER3Q9NUN7 267 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SNX11Q9Y5W9 270 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 YY2O15391 372 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 NOS1APO75052 506 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 GPX5O75715 221 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 NCR1O76036 304 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 SLCO2B1O94956 709 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ACTR1BP42025 376 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 MAN2A2P49641 1150 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 PRLHRP49683 370 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 WNT3P56703 355 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ACTR1AP61163 376 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 STXBP1P61764 594 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 IFITM3Q01628 133 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 PRKCDQ05655 676 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF155Q12901 538 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 SELENBP1Q13228 472 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 GBX1Q14549 363 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 MLIPQ5VWP3 458 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 MEDAGQ5VYS4 303 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 CNIH2Q6PI25 160 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ERN2Q76MJ5 926 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 RANBP3LQ86VV4 465 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 NRMQ8IXM6 262 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ANKK1Q8NFD2 765 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 NUP43Q8NFH3 380 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 OR4F15Q8NGB8 312 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 RIPOR3Q96MK2 946 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 C1QTNF7Q9BXJ2 289 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 MTIF3Q9H2K0 278 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 SRMSQ9H3Y6 488 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 RANGRFQ9HD47 186 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ENAMQ9NRM1 1142 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 SPATA6Q9NWH7 488 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 TEX10Q9NXF1 929 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF226Q9NYT6 803 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 CALML5Q9NZT1 146 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 YARS2Q9Y2Z4 477 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 M0R082 166 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 EEF1E1O43324 174 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 PRAMEF4O60810 478 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 TOXO94900 526 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 HMGN1P05114 100 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 WNT4P56705 351 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC7A9P82251 487 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 DSG2Q14126 1118 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNHIT3Q15649 155 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF750Q32MQ0 723 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 DEFB134Q4QY38 66 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 PRAMEF9Q5VWM5 478 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 FCRLBQ6BAA4 426 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 PLBD1Q6P4A8 553 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 PAMR1Q6UXH9 720 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 UNC5DQ6UXZ4 953 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 MFSD4AQ8N468 514 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ASB15Q8WXK1 588 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 BTBD1Q9H0C5 482 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 FZD3Q9NPG1 666 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 TMEM138Q9NPI0 162 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 TMEM184CQ9NVA4 438 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 PCNTO95613 3336 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 EDDM13A0A1B0GTR0 161 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 A0A1W2PP55 124 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 TPD52L2O43399 206 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 HPGDSO60760 199 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ADRB3P13945 408 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 APEX1P27695 318 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ACSL1P33121 698 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 HNRNPFP52597 415 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ABATP80404 500 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 SIM1P81133 766 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF33BQ06732 778 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 MAB21L1Q13394 359 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ADAM15Q13444 863 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 TCEAL5Q5H9L2 206 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ATAD3CQ5T2N8 411 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 MTFR2Q6P444 385 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 FAHD1Q6P587 224 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 FRRS1Q6ZNA5 592 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 KLHDC8AQ8IYD2 350 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 GJD3Q8N144 294 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 SYT14Q8NB59 555 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 CYB561A3Q8NBI2 242 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 OR51L1Q8NGJ5 315 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 WFIKKN2Q8TEU8 576 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF566Q969W8 418 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 DTD2Q96FN9 168 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 C7orf34Q96L11 122 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 RSPH9Q9H1X1 276 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 ABCG5Q9H222 651 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 TM7SF3Q9NS93 570 aa6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 CNOT2Q9NZN8 540 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 CCDC59Q9P031 241 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-206ENST00000610556 NDOR1Q9UHB4 597 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms