RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 YY1AP1Q9H869 796 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 NECTIN3Q9NQS3 549 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 ADPRHL2Q9NX46 363 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 CLDN16Q9Y5I7 305 aa16.83■□□□□ 0.28
VRK3-225ENST00000601912 SYNDIG1LA6NDD5 238 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 OR2W5A6NFC9 320 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 TGFBR3LH3BV60 316 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 GDF9O60383 454 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 COQ9O75208 318 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 PRKD3O94806 890 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 ZNF682O95780 498 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 AGR2O95994 175 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 BCHEP06276 602 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 TFPTP0C1Z6 253 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 RAP2AP10114 183 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 NR2F1P10589 423 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 FCGR1AP12314 374 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 CCL4P13236 92 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 TNNI3P19429 210 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 AQP1P29972 269 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 PTDSS1P48651 473 aaKnown RBP16.82■□□□□ 0.28
VRK3-225ENST00000601912 MGAT2Q10469 447 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 ELOAQ14241 798 aaKnown RBP16.82■□□□□ 0.28
VRK3-225ENST00000601912 ATAD3BQ5T9A4 648 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 MFSD12Q6NUT3 480 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 ZCCHC12Q6PEW1 402 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 RNF111Q6ZNA4 994 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 CCDC80Q76M96 950 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 PATL1Q86TB9 770 aaKnown RBP16.82■□□□□ 0.28
VRK3-225ENST00000601912 SLC44A2Q8IWA5 706 aaPredicted RBP16.82■□□□□ 0.28
VRK3-225ENST00000601912 PAPD5Q8NDF8 572 aaKnown RBP16.82■□□□□ 0.28
VRK3-225ENST00000601912 ADAMTS15Q8TE58 950 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 PYURFQ96I23 114 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 OR7D2Q96RA2 312 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 ASPSCR1Q9BZE9 553 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 TGIF2Q9GZN2 237 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 ADAP2Q9NPF8 381 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 SLC39A1Q9NY26 324 aa16.82■□□□□ 0.28
VRK3-225ENST00000601912 DYRK3O43781 588 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 SLC28A2O43868 658 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 ONECUT2O95948 504 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CDK4P11802 303 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 AGXTP21549 392 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 GCKP35557 465 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CLCN2P51788 898 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 MYBPC3Q14896 1274 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 TRIP6Q15654 476 aaKnown RBP16.81■□□□□ 0.28
VRK3-225ENST00000601912 CDC73Q6P1J9 531 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 ENPP6Q6UWR7 440 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 LRRC74BQ6ZQY2 392 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CBLL1Q75N03 491 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 COX15Q7KZN9 410 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 EIF3MQ7L2H7 374 aaKnown RBP16.81■□□□□ 0.28
VRK3-225ENST00000601912 PIP4P1Q86T03 277 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 PACS2Q86VP3 889 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 SLC47A1Q96FL8 570 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 TMEM19Q96HH6 336 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 MAGIXQ9H6Y5 334 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 EXD2Q9NVH0 621 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 C14orf105Q9NVL8 296 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 LIPT1Q9Y234 373 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 IGLV3-12A0A075B6K2 115 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 SUV39H1O43463 412 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 TIPRLO75663 272 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 PDE9AO76083 593 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CT62P0C5K7 136 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 FASP25445 335 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 SOX18P35713 384 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 ISXQ2M1V0 245 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CRB2Q5IJ48 1285 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CDCP2Q5VXM1 449 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 DGAT2L6Q6ZPD8 337 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CDRT4Q8N9R6 151 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 DOK4Q8TEW6 326 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 RNF31Q96EP0 1072 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 PKP2Q99959 881 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CHID1Q9BWS9 393 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 SLC22A11Q9NSA0 550 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 CTSFQ9UBX1 484 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 MKL2Q9ULH7 1088 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 LOXL2Q9Y4K0 774 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 PCDHGB3Q9Y5G1 929 aa16.81■□□□□ 0.28
VRK3-225ENST00000601912 IGKV3D-11A0A0A0MRZ8 115 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 M0QX08 132 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 MEN1O00255 615 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 TPST1O60507 370 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 SOX30O94993 753 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 PGM3O95394 542 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 KLK3P07288 261 aaPredicted RBP16.8■□□□□ 0.28
VRK3-225ENST00000601912 RORAP35398 523 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 MAN2A2P49641 1150 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 CRISP3P54108 245 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 PCBP3P57721 371 aaKnown RBP16.8■□□□□ 0.28
VRK3-225ENST00000601912 RAB15P59190 212 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 RHAGQ02094 409 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 ZNF267Q14586 743 aaPredicted RBP16.8■□□□□ 0.28
VRK3-225ENST00000601912 EXOSC7Q15024 291 aaKnown RBP16.8■□□□□ 0.28
VRK3-225ENST00000601912 NSDHLQ15738 373 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 CYBRD1Q53TN4 286 aa16.8■□□□□ 0.28
VRK3-225ENST00000601912 OVCH1Q7RTY7 1134 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms