RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 SGO1Q5FBB7 561 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 OGFOD2Q6N063 350 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 QSOX2Q6ZRP7 698 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 FAM9CQ8IZT9 166 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 CA13Q8N1Q1 262 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 ARMC10Q8N2F6 343 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 MIER2Q8N344 545 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 FNDC5Q8NAU1 212 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 C16orf52Q8NHV5 167 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 RP9Q8TA86 221 aaKnown RBP12.71□□□□□ -0.37
IRF3-225ENST00000600022 CREB3L4Q8TEY5 395 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 MCUR1Q96AQ8 359 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 SLC6A16Q9GZN6 736 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 PITHD1Q9GZP4 211 aaPredicted RBP12.71□□□□□ -0.37
IRF3-225ENST00000600022 NMRK1Q9NWW6 199 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 KCMF1Q9P0J7 381 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 TNFRSF10DQ9UBN6 386 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 EIF3LQ9Y262 564 aaKnown RBP12.71□□□□□ -0.37
IRF3-225ENST00000600022 TSC22D4Q9Y3Q8 395 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 PCDHGA11Q9Y5H2 935 aa12.71□□□□□ -0.37
IRF3-225ENST00000600022 ZNF407Q9C0G0 2248 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
IRF3-225ENST00000600022 SERTM1A2A2V5 107 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 B2RBV5 119 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 G3V3Y1 287 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 ITGA10O75578 1167 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 MYO1DO94832 1006 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 C1GALT1C1LP0DN25 315 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 COX4I1P13073 169 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 JAK1P23458 1154 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 PMPCAQ10713 525 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 STX5Q13190 355 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 SLBPQ14493 270 aaKnown RBP eCLIP12.7□□□□□ -0.38
IRF3-225ENST00000600022 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
IRF3-225ENST00000600022 FRG2Q64ET8 278 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 TMEM198Q66K66 360 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 SCIMPQ6UWF3 145 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 TRIM46Q7Z4K8 759 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 TREML1Q86YW5 311 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 LAS2Q8IYD9 372 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 KRT78Q8N1N4 520 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 LILRB4Q8NHJ6 448 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 WDR20Q8TBZ3 569 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 TMEM125Q96AQ2 219 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 MARK4Q96L34 752 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 C3orf30Q96M34 536 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 FRG2BQ96QU4 278 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 BTBD10Q9BSF8 475 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 PRDM9Q9NQV7 894 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 PNO1Q9NRX1 252 aaKnown RBP12.7□□□□□ -0.38
IRF3-225ENST00000600022 TMEM45AQ9NWC5 275 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 COQ3Q9NZJ6 369 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 NOP53Q9NZM5 478 aaKnown RBP12.7□□□□□ -0.38
IRF3-225ENST00000600022 FBXW2Q9UKT8 454 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 PTGDR2Q9Y5Y4 395 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 HCFC1P51610 2035 aa12.7□□□□□ -0.38
IRF3-225ENST00000600022 HRNRQ86YZ3 2850 aaPredicted RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 NPIPB8E9PQR5 432 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 ZNF354AO60765 605 aaPredicted RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 T-ENOLP0DO92 83 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 RNH1P13489 461 aaKnown RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 HSD3B1P14060 373 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 HSD3B2P26439 372 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 NUP107P57740 925 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 BTN3A2P78410 334 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 EMX2Q04743 252 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 CSTF3Q12996 717 aaKnown RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 SNTB1Q13884 538 aaKnown RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 AP5B1Q2VPB7 878 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 MMEL1Q495T6 779 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 AGKQ53H12 422 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 TOR1AIP1Q5JTV8 583 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 MED27Q6P2C8 311 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 TBC1D19Q8N5T2 526 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 ZNF321PQ8N8H1 164 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 ZFP62Q8NB50 900 aaPredicted RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 B3GNT7Q8NFL0 401 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 OR5M9Q8NGP3 310 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 NCLNQ969V3 563 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 ZBTB18Q99592 522 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 AIF1LQ9BQI0 150 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 MRPL1Q9BYD6 325 aaKnown RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 C1orf21Q9H246 121 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 LRTM1Q9HBL6 345 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 KLF13Q9Y2Y9 288 aaPredicted RBP12.69□□□□□ -0.38
IRF3-225ENST00000600022 CCL27Q9Y4X3 112 aa12.69□□□□□ -0.38
IRF3-225ENST00000600022 AKAP6Q13023 2319 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 ACANP16112 2415 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 LOC100653049A0A140TA62 436 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 FAM166BA8MTA8 275 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 NPIPA2E9PIF3 369 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 NPIPA3F8WFD2 350 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 KLRC4-KLRK1H3BQV0 150 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 SEC22BO75396 215 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 OR2J2O76002 312 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 KRT34O76011 436 aa12.68□□□□□ -0.38
IRF3-225ENST00000600022 RSL1D1O76021 490 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms